Gene Daud_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0178 
Symbol 
ID6026923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp204047 
End bp204571 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID641593031 
ProductFirmicute transcriptional repressor of class III stress genes 
Protein accessionYP_001716374 
Protein GI169830392 
COG category[K] Transcription 
COG ID[COG4463] Transcriptional repressor of class III stress genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTCAC TGCCGACTCT CGCCGACAGC ATTGCGGAAT ACATCAAAAG GCGCGTGGCG 
GAAAGCCCGC ACGGTTACGT CGAGATCCGG CGCAACGACC TGGCCGAACG ATTTCAGTGC
GTACCGTCCC AGGTGACCTA CGTTCTGGCC ACCAGGTTCC ATGTACGGAC CGGGTTTGTG
GTGGAAAGCC GGCGCGGCGG CGGCGGCTAC ATTCGTGTGG TCCGATTGCC CTCGGCGCAG
AACGGGCTGG CCCGGGAATT GTATCGCCTG ATCGGGTCCC GCATCGGGTC CCGTGAGGCC
CGGGAGATAG TGCTGCGCCT GCGCGCGGAA GGCTTGATCG GGGAACGCGA GACCCGCCTG
ATCAGCGGCG CGGTTGACGA CCGGACCCTG CGCGTGCTGG ATTTTCCCTG GCGCAACCTG
GTCCGGGCCA GCATCCTGAA GGAGATGCTC AGCGCACTCC TGCACGAAGC GGCCGGGCCG
GGCAGTGGCC GCAGGGCCGG AAAAGGAGAT GAGGGCACCC CTTGA
 
Protein sequence
MRSLPTLADS IAEYIKRRVA ESPHGYVEIR RNDLAERFQC VPSQVTYVLA TRFHVRTGFV 
VESRRGGGGY IRVVRLPSAQ NGLARELYRL IGSRIGSREA REIVLRLRAE GLIGERETRL
ISGAVDDRTL RVLDFPWRNL VRASILKEML SALLHEAAGP GSGRRAGKGD EGTP