Gene Daud_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0172 
Symbol 
ID6027547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp196943 
End bp197674 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID641593025 
Producthydrolase 
Protein accessionYP_001716368 
Protein GI169830386 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATGCA AGTACCTGCT TCTGGACCTG GACGGGACCC TGCTGCCGAT GGACAAGGAG 
AAATTCCTCA GGGGCTACGT CCAGGCGGTG GCGGCTAAAA TGGCACCCCA CCTAGCCCCC
GAACGTTTCG TCAAGCACCT TTTGGCCGCC ACCCGGGCCA TGATCGAGAA CCTGGATCCG
AAGCTGACCA ACGCCGAGGT CTTCCGGACC GACTTCTTCG CCCGGTCCGG ACTGCCGGAG
AAAGAGACCA TGGCCATTTT TGAACGGTTC TACCGCGAGG ATTTCCCCAA ATTGGCATCC
CTGACAAGTA CCACCCCGCT GGCCCGCGCG GTCTGCACGC AGGCCCTCGA ACGGGGGATC
GAACTGGTGG TCGCCACCAA CCCGATCTTC CCGCGGATGG CCATCGAAGA ACGTTTGCGT
TGGGCCGGAG TCGGCGACCT CCCCTTCCGG CTGGTGACGG TCTACGAAAA CATGCACTTC
TGCAAGCCGA GGCCCCAATA CTACCAGGAG ATTCTGGACC TCCTCGGGGC CGGACCCGCG
GATTGCCTGA TGGCCGGCAA CGACCCGGAA GAGGACCTGG TTGCCGGTGA TCTGGGTATC
CGGACTTTCC TGGTGACTGA TTGCCTGATT ACGCGTGACG GGTGTGACCG TCGTCCCGAT
TTCAGCGGGC GGCTCTCGGA CCTCCTGACC TTCATCACGC ACCGGGGAAA AACGGCTTCC
GGTCAACAGT AG
 
Protein sequence
MPCKYLLLDL DGTLLPMDKE KFLRGYVQAV AAKMAPHLAP ERFVKHLLAA TRAMIENLDP 
KLTNAEVFRT DFFARSGLPE KETMAIFERF YREDFPKLAS LTSTTPLARA VCTQALERGI
ELVVATNPIF PRMAIEERLR WAGVGDLPFR LVTVYENMHF CKPRPQYYQE ILDLLGAGPA
DCLMAGNDPE EDLVAGDLGI RTFLVTDCLI TRDGCDRRPD FSGRLSDLLT FITHRGKTAS
GQQ