| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0140 |
|---|
| Symbol | |
|---|
| ID | 6025557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 159260 |
|---|
| End bp | 161104 |
|---|
| Gene Length | 1845 bp |
|---|
| Protein Length | 614 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641592996 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_001716340 |
|---|
| Protein GI | 169830358 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0103295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TAGCAGGCTG GATCGACTGG GAGCGGGACC TGCGCCGGGA GTGTCCGGTG
ATCACCGAAA TGACCGGGAC TCTGGCCGCC CGGGGACCGG ACGCCTCCGG CTTCTGGCTT
TCGGAGCACG CCGCCCTTGG TCACCGGCGC CTGATCGTGG TGGACCCGGA AGGAGGGGGC
CAGCCCATGG TCCGCCGGTG CGGGGAACGC GAGTACGTCC TGGTGTACAA CGGTGAACTC
TACAACACCC CCGAACTGCG CCGGGACCTG GAGGCACGCG GGCACGTTTT CCGGGGCCAC
TCGGACACGG AGGCGCTCCT CTTGTCGTAC ATCGAGTGGG GAGCCGACTG TGTCGGGCGC
CTGAACGGTA TCTTCGCCTT CGCGGTCTGG AGTGAATACG ACCAGAGTCT CTTCATGGCC
CGCGACCGGA TGGGAGTCAA GCCCCTCTTC TACGCCGTGC GGGGCGGGGC GTTCCTCTTC
GGCTCGGAGC AGAAGGCGAT CCTGGCCCAC CCCGACGTCC GGCCGGAGGT GGACGCCGAG
GGGCTGGCCG AGGTTTTCGC GCTCGGCCCG GCCCGGACGC CGGGACACGG CGTGTTTCGC
GGCATCTCGG AACTGCGGCC CGGATACTGC CTTTTTTTCG ACCGGAACGG CGTCCGCACC
CGGCGCTACT GGAGGTTGGA AAGCCGGCCG CACACCGACG ACCTGCCCGC CACCGCGGCC
AAAGTACGGG CGCTCCTGCA GGACTCCGTA GAACGGCAGT TGGTGGCCGA CGTACCGGTG
TGCACACTGC TTTCGGGCGG CCTGGACTCC AGCGCGCTGA CCGCCTTCGC CGCCGGCGCC
TTCCGGAAAA GCGGCCGGGG CACGGTGCAC ACCTACTCCA TCGATTTCGT GGATAACGAG
CGGTATTTCC GCCCGAACCG GTTCCAGCCC GACGCGGATT CCGCCTGGGT GGGCCTGGTG
TCGGACCGGC TGGGCACCAT TCACCACCCG GTGTGGGTCG ACACCCCGGA ACTCGTGGAC
ACCCTGGGCT TGGCCGTCCA GGCCCGCGAC CTGCCCGGCA TGGCGGACAT CGACACTTCG
CTCTACCTGT TCTGCCGCGA GATCAAGAAG GAGTTCACCG TGGCGCTGTC GGGCGAGTGC
GCCGACGAAA TGTTCGGCGG CTACCCGTGG TTCCACCGGG AGGAGGACCT TGCGGCCGGG
ACCTTTCCCT GGTCCCGCTC CACCAGGGCG CGGATGCGGC TCTTGAAGCC GGAACTGGCC
CGGGAACTCC GCCCGGAGGA ATATGTGGCC GCCCGGTACG CCGAAACCCT GGCCGAGGTA
CCCCGCCTGT CCGGCGAGGA CCCGGTCGGG GCCCGCCGGC GCGAGATGTT CTACTTAAAC
CTCGTGTGGT TCATGACCAC GCTTTTGGAC CGCAAGGACC GCATGAGCAT GGCCACCGGC
CTCGAGGTGC GAGTCCCCTT CTGCGACCAC CGCCTGGTGG AGTACGTGTG GAACATCCCC
TGGGCTCTAA AAACATGGGG CGGGCGGGAA AAGGGTATTC TGCGCCTGGC CCTGGACGGC
GTCGTCCCCG GAGAGGTGCT CCACCGGCGG AAAAGCCCCT ACCCGAAGAC CCACCACCCC
GGCTACCTGG AGGCGGTCCG GTCGAAACTC CGGCAGGTGC TGGACGATCC AGCCTCCCCC
CTGCTCACGC TCATCGACAC CACCTGCGTG CGTGAACTGG TCCAGACGGA CGGCTCCTCG
TTCGGCACCA CCTGGTTCGG GCAGCTGATG GCCGGCCCGC AGCTCTTCGC CTATCTCTAC
CAGGTCGACG CCTGGCTGCG TGAGTACCGG GTGACCATCC GGTGA
|
|---|
| Protein sequence | MCGIAGWIDW ERDLRRECPV ITEMTGTLAA RGPDASGFWL SEHAALGHRR LIVVDPEGGG
QPMVRRCGER EYVLVYNGEL YNTPELRRDL EARGHVFRGH SDTEALLLSY IEWGADCVGR
LNGIFAFAVW SEYDQSLFMA RDRMGVKPLF YAVRGGAFLF GSEQKAILAH PDVRPEVDAE
GLAEVFALGP ARTPGHGVFR GISELRPGYC LFFDRNGVRT RRYWRLESRP HTDDLPATAA
KVRALLQDSV ERQLVADVPV CTLLSGGLDS SALTAFAAGA FRKSGRGTVH TYSIDFVDNE
RYFRPNRFQP DADSAWVGLV SDRLGTIHHP VWVDTPELVD TLGLAVQARD LPGMADIDTS
LYLFCREIKK EFTVALSGEC ADEMFGGYPW FHREEDLAAG TFPWSRSTRA RMRLLKPELA
RELRPEEYVA ARYAETLAEV PRLSGEDPVG ARRREMFYLN LVWFMTTLLD RKDRMSMATG
LEVRVPFCDH RLVEYVWNIP WALKTWGGRE KGILRLALDG VVPGEVLHRR KSPYPKTHHP
GYLEAVRSKL RQVLDDPASP LLTLIDTTCV RELVQTDGSS FGTTWFGQLM AGPQLFAYLY
QVDAWLREYR VTIR
|
|---|
| |