| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0138 |
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| Symbol | |
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| ID | 6027430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 153881 |
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| End bp | 157897 |
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| Gene Length | 4017 bp |
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| Protein Length | 1338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641592994 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001716338 |
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| Protein GI | 169830356 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTCGT CAGGCGAGAT CGGCTTGTTT CAAGAGTTGG TTGATCTTGA AGATGTACAG
CGTCTGCAAG CGGACTTCTC GGCGGCCACC GGTCTGGCCA CCTCGATTCT GGACCCGTCC
GGCCGGGTGC TGACCAACTC CGGCTGGAGT GATCTCTGCA CCGTCTTTCA CCGCCGCTCC
CCCGCCGGCG CCGCCCGTTG CCGGGAAAGC GACCGTCGGA TTCTGGCCGG GGTGGCCCAA
AAGCAGGGTG AGGTGATTCA GGTCTGCGCC AACGGCTTGG TAATGGCGGC CACGCCTATT
GTCGTCGCCG GGCGCCACCT CGCCACGATC GTTCTGAGCC AGGTGTTCTT CGAACCCCCC
GATGAGGACT ACTTCCGGTC CCAGGCGCGC ACGCTCGGCC TCGAGGAGGA GCCCTACCTG
GAAGCGGTCC GCCGCATCCG GGTGCTGCCG AAAGAGGAGT TCCTGCCCAA ACTGCGGTTC
ATCGGCAACC TTGCGGGGCT CATTTCGAAT CAGGGTCAGC GCAACTGGGA GCAGAAAGCG
CTGGAAGATG AACTACGCCG GGAGCGGGCA CATCTGCAAG CCATTTTCCA GGGTTCTGGC
AGCGGCATGC GGATCATCGG CACTGACTAT CGCATTGTCC AACAGAATCA GGAGATGGAG
AGGCTCTCGG GCGTGCCTGG TCAGGAGGCC GTCGGCCAAA AGTGTTTCAA GTCCTTTCAC
CACGCCTATT GTGGAACCGC GGACTGTATT CTGCACCGGA TTCTGGCGGG TGAGGAGCGC
GTGCGGCTCG AAGTTGAAAA AACGCGGCCT GACGGCCGGA GAATCGACGT CAGCCTGATC
GCCACCCCGC TCAAGAACGC CGCCGGAGAG ATCGTCGGCG TGATCGAAAG CTTCCAGGAC
ATCACCGAAC GGAAGTTAAT GGAAGAAAGA CTCCGCACCT CCCAGAACAT CCTCAACATG
GTCTTCAACA ACGTATACGA CGCCATTTTC ATTCACGCGC CCGACGGTCG GATCATCGAC
GTCAACCGCA AAATGCTCGA AATGTACGGG GTCGAGCGGG ACCAGGCACT CACCTTGTCT
ATCCGTGATG ACTATTCCGG CCCGGACAAC CCGCTGGACC GGTTGCCCGT GATGTGGAAC
AAAGTGGTCG CCGGGGAGCC TCAGCTTTTC GAATGGCAGG CCCGCCGGCC CGGAGATGGT
TCGGTCTTTG ATGTGGAAGT ATTCTTGTGC AAACTGGTTC TGAACGGGGA CGACGTGATC
CTGGCCACTG TTCGGGACAT CACCGAACGG AAGCGCAACC AGAAGGCCTT GCAGGACAGC
CATGAGGAAC TCGAGACGGC CAACGAGGAA CTGGTCGCGG TCAACGAGGA ACTGGTCGCG
GCCGAGGAAG AACTGAGGGA TCAGCTCGAG GCGCTGGAAA AAAGCCGGAA AGCCTTGGAG
GCCGCCAACA GGCAGCTGGC GGATATTATT GAGTTTTTGC CCGACGCCAC CTTCGTCGTG
GACCGCGACC GGAAGGTGGT CGCCTGGAAC CGGGCCATGG AAGAACTGAC CGGTGTGCGC
AAGGAGGCTA TCATCGGCCA GGGCGATTAT GCCTGCGCCA CGCCTTTATA CGGGAAGCGC
AGGCCGATCC TGGTGGACCT CATCTTCGGC CGGGTAGGTG CGGACCTGGA AAAGCACTAT
GAGTATATCA AGCGCAAAGG GAACACCCTC TACGCCGAGG CGTTCATGCC GATGGTGAAA
AACGGACGGG GGGCCCACGT TTGGATTACG GCTTCGCCGC TCTTTGACCA CGCGGGCAAA
CTGGTCGGGG CCATCGAGTC GGTCCGCGAT ATTTCGGACC ACAAGCGGGC ACAAGAGGAA
ATCAGGACCC AGAAAGCCTA CTTCGAACAG CTTTTCGAAA ACTCGCCCCT GGCCATCGTC
ATGTTCGACA ACCGGGAGCG GATCATCAGC GCCAATCGGG GATTTCAAAA CCTCTTTCAG
TACTCCGCCG AGGAGGTCAC CGGCCGCCCG ATCGATGAGA TCGTCACCCC CCCGGAGTTG
TCCGATGAAG GTGCCGCTTT CTCGCGTATT GTTTGTGAAG GGGGAATTGT GCAGGGCGAG
TCGGTGCGCA AACGGAAGGA CGGCAGTCTG GTGGATGTGA GCCTCTTGGC GTTCCCAATT
GTGGTCGACA ATCAACTGGT GGGCGCGTAC GCCATATACA ACGACATCAC GGCACGCAAG
CAGGCGCAGG CGGCGCTGCA AGAAAGCGAG GAACGACTGA AAACGGTACT TGATTCCATT
CAGAGCGGGG TGGTGGTCAT TGATGCGGAG ACACACGAGA TCGTAAGCGC TAACCGCGTG
GCCGTTGAAA TGATCGGCTG TCCCGTGGAA GAAATCGTCG GTTCGGTCTG TCACCATTTC
ATCTGCCCGG CCGAAAAGGG CGAGTGTCCG ATTACCGACC TTGGACAGAG CATCGACCAC
TCAGAGCGCG TCTTGATCAG AAAGGGTGGC GAAATCGTAT CGATCATCAA AACCGTGGTG
CCGGTGGTAT TCAACGGCCG CAGGCACCTC ATCGAAAGCT TTGTCGACAT CACGGCGCGC
AAACAGGCGG AGGAGCAGTT GAGGAAGGCC AAGGCGCTTC TGGATGGGGT GCTGGATGCA
ATTCCGGACG CCGTCGGGGT TCAGGATGCC GACCACCGCA TGATCCGCCT GAACCAGGCG
GGATACCGGT TGTTGAACCT AACACCGGAA GAGATCAAGG GCCGGAAGTG TTACGAGCTG
TTTGGACGTT CAAACAGGTG CCGGCCGTGC GCCACCGAGA AGGCCTGGCG GACGAAACGG
CTGGAAAGAG TAGAGAAGTA CATCCCCGAA CTGGACCGTT ACCTGGACTG CCGCAGCAAC
CCTGTGACTG ACGAGAACGG CGAGATCATC ATGGTGGTGG AGCAGTTCTA CGATATAACC
GAGCGCCGAC GGATGGAGGA ACAATTACGG CACCTCAGTC TGCACGATCC GCTGACCGGG
CTCTACAACC GGAACTACTT CGAGCGGGAG ATGCGCCGCG CCGAGGGGAT GCGCCAGGTT
CCGGTCGGCA TTATCGTCTG CGACGTGGAC GGGCTGAAAC TGGTGAACGA CACCCTGGGG
CACGACGCCG GGGACGCTCT ACTCGTGGCC ACCGCCGGGG TGCTCAAGAG GTCCTTTCGC
CCGGGCGACA TGGTCGCCCG GGTCGGCGGT GACGAGTTCG CCGTACTGCT CCCCGGCAGC
GGCCGAGACG TCGTGGAAGA GGCGGGCAAC CGCATCCGGG AAGCGGTCGA GACCTATAAC
GCCGCGAACC CCGGGATGGC CTTAAGCGTC TCCGTCGGTT TTGCCGTGGC TGACGAGTCG
CCGGTGAATG TGAACGAGCT CTTCCGGGAA GCGGACAACA ACATGTACCG TGCCAAGCTG
CACCGCAGCC GGAGCGCCCG CAGCGCCATC GTCCAGACCC TGATGAAGGC GCTGGAGGCC
CGCGATTTCA TCACCGAGGG TCACGCCGAC CGCCTGCAAG CGCTGGTCGT TTCCATGGCG
GCGGCGCTCG AGCAGCCCGA ACGAAGAATA GCCGACCTCC GCCTTCTGGC CCAGTTCCAC
GACATCGGCA AGGTAGGGAT ACCCGACCGC ATCCTCTTCA AGGCCGGACC CCTGACTCCG
GAGGAAGTCG CCGAGATGCG GCGGCACTGC GAAATCGGCC ACCGGATCGC GCTTTCAGCG
CCCGACCTGA TCCCCATTGC GGACTGGATC CTGAAGCATC ACGAGTGGTG GAACGGTGAG
GGATACCCGC TCGGCCTCAA GGGGGAAGAA ATCCCATTGG AGTGCCGCAT TTTGGCCATT
GCCGACGCCT ACGACACCAT GACTAATGAC CGCCCCTACC GGAAGGCGAT GACTCACAGG
GAAGCAATAA CCGAACTGAA AACGTACGCC GGGATCCAGT TCGACCCGGC GTTGGTAGAG
GTGTTTGTGC AGCTGTTTGA CCAGCAGGCG GCGCCACCGG ACTCAACCGG CTTCTAG
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| Protein sequence | MRSSGEIGLF QELVDLEDVQ RLQADFSAAT GLATSILDPS GRVLTNSGWS DLCTVFHRRS
PAGAARCRES DRRILAGVAQ KQGEVIQVCA NGLVMAATPI VVAGRHLATI VLSQVFFEPP
DEDYFRSQAR TLGLEEEPYL EAVRRIRVLP KEEFLPKLRF IGNLAGLISN QGQRNWEQKA
LEDELRRERA HLQAIFQGSG SGMRIIGTDY RIVQQNQEME RLSGVPGQEA VGQKCFKSFH
HAYCGTADCI LHRILAGEER VRLEVEKTRP DGRRIDVSLI ATPLKNAAGE IVGVIESFQD
ITERKLMEER LRTSQNILNM VFNNVYDAIF IHAPDGRIID VNRKMLEMYG VERDQALTLS
IRDDYSGPDN PLDRLPVMWN KVVAGEPQLF EWQARRPGDG SVFDVEVFLC KLVLNGDDVI
LATVRDITER KRNQKALQDS HEELETANEE LVAVNEELVA AEEELRDQLE ALEKSRKALE
AANRQLADII EFLPDATFVV DRDRKVVAWN RAMEELTGVR KEAIIGQGDY ACATPLYGKR
RPILVDLIFG RVGADLEKHY EYIKRKGNTL YAEAFMPMVK NGRGAHVWIT ASPLFDHAGK
LVGAIESVRD ISDHKRAQEE IRTQKAYFEQ LFENSPLAIV MFDNRERIIS ANRGFQNLFQ
YSAEEVTGRP IDEIVTPPEL SDEGAAFSRI VCEGGIVQGE SVRKRKDGSL VDVSLLAFPI
VVDNQLVGAY AIYNDITARK QAQAALQESE ERLKTVLDSI QSGVVVIDAE THEIVSANRV
AVEMIGCPVE EIVGSVCHHF ICPAEKGECP ITDLGQSIDH SERVLIRKGG EIVSIIKTVV
PVVFNGRRHL IESFVDITAR KQAEEQLRKA KALLDGVLDA IPDAVGVQDA DHRMIRLNQA
GYRLLNLTPE EIKGRKCYEL FGRSNRCRPC ATEKAWRTKR LERVEKYIPE LDRYLDCRSN
PVTDENGEII MVVEQFYDIT ERRRMEEQLR HLSLHDPLTG LYNRNYFERE MRRAEGMRQV
PVGIIVCDVD GLKLVNDTLG HDAGDALLVA TAGVLKRSFR PGDMVARVGG DEFAVLLPGS
GRDVVEEAGN RIREAVETYN AANPGMALSV SVGFAVADES PVNVNELFRE ADNNMYRAKL
HRSRSARSAI VQTLMKALEA RDFITEGHAD RLQALVVSMA AALEQPERRI ADLRLLAQFH
DIGKVGIPDR ILFKAGPLTP EEVAEMRRHC EIGHRIALSA PDLIPIADWI LKHHEWWNGE
GYPLGLKGEE IPLECRILAI ADAYDTMTND RPYRKAMTHR EAITELKTYA GIQFDPALVE
VFVQLFDQQA APPDSTGF
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