Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0138 |
Symbol | |
ID | 6027430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 153881 |
End bp | 157897 |
Gene Length | 4017 bp |
Protein Length | 1338 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641592994 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001716338 |
Protein GI | 169830356 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCTCGT CAGGCGAGAT CGGCTTGTTT CAAGAGTTGG TTGATCTTGA AGATGTACAG CGTCTGCAAG CGGACTTCTC GGCGGCCACC GGTCTGGCCA CCTCGATTCT GGACCCGTCC GGCCGGGTGC TGACCAACTC CGGCTGGAGT GATCTCTGCA CCGTCTTTCA CCGCCGCTCC CCCGCCGGCG CCGCCCGTTG CCGGGAAAGC GACCGTCGGA TTCTGGCCGG GGTGGCCCAA AAGCAGGGTG AGGTGATTCA GGTCTGCGCC AACGGCTTGG TAATGGCGGC CACGCCTATT GTCGTCGCCG GGCGCCACCT CGCCACGATC GTTCTGAGCC AGGTGTTCTT CGAACCCCCC GATGAGGACT ACTTCCGGTC CCAGGCGCGC ACGCTCGGCC TCGAGGAGGA GCCCTACCTG GAAGCGGTCC GCCGCATCCG GGTGCTGCCG AAAGAGGAGT TCCTGCCCAA ACTGCGGTTC ATCGGCAACC TTGCGGGGCT CATTTCGAAT CAGGGTCAGC GCAACTGGGA GCAGAAAGCG CTGGAAGATG AACTACGCCG GGAGCGGGCA CATCTGCAAG CCATTTTCCA GGGTTCTGGC AGCGGCATGC GGATCATCGG CACTGACTAT CGCATTGTCC AACAGAATCA GGAGATGGAG AGGCTCTCGG GCGTGCCTGG TCAGGAGGCC GTCGGCCAAA AGTGTTTCAA GTCCTTTCAC CACGCCTATT GTGGAACCGC GGACTGTATT CTGCACCGGA TTCTGGCGGG TGAGGAGCGC GTGCGGCTCG AAGTTGAAAA AACGCGGCCT GACGGCCGGA GAATCGACGT CAGCCTGATC GCCACCCCGC TCAAGAACGC CGCCGGAGAG ATCGTCGGCG TGATCGAAAG CTTCCAGGAC ATCACCGAAC GGAAGTTAAT GGAAGAAAGA CTCCGCACCT CCCAGAACAT CCTCAACATG GTCTTCAACA ACGTATACGA CGCCATTTTC ATTCACGCGC CCGACGGTCG GATCATCGAC GTCAACCGCA AAATGCTCGA AATGTACGGG GTCGAGCGGG ACCAGGCACT CACCTTGTCT ATCCGTGATG ACTATTCCGG CCCGGACAAC CCGCTGGACC GGTTGCCCGT GATGTGGAAC AAAGTGGTCG CCGGGGAGCC TCAGCTTTTC GAATGGCAGG CCCGCCGGCC CGGAGATGGT TCGGTCTTTG ATGTGGAAGT ATTCTTGTGC AAACTGGTTC TGAACGGGGA CGACGTGATC CTGGCCACTG TTCGGGACAT CACCGAACGG AAGCGCAACC AGAAGGCCTT GCAGGACAGC CATGAGGAAC TCGAGACGGC CAACGAGGAA CTGGTCGCGG TCAACGAGGA ACTGGTCGCG GCCGAGGAAG AACTGAGGGA TCAGCTCGAG GCGCTGGAAA AAAGCCGGAA AGCCTTGGAG GCCGCCAACA GGCAGCTGGC GGATATTATT GAGTTTTTGC CCGACGCCAC CTTCGTCGTG GACCGCGACC GGAAGGTGGT CGCCTGGAAC CGGGCCATGG AAGAACTGAC CGGTGTGCGC AAGGAGGCTA TCATCGGCCA GGGCGATTAT GCCTGCGCCA CGCCTTTATA CGGGAAGCGC AGGCCGATCC TGGTGGACCT CATCTTCGGC CGGGTAGGTG CGGACCTGGA AAAGCACTAT GAGTATATCA AGCGCAAAGG GAACACCCTC TACGCCGAGG CGTTCATGCC GATGGTGAAA AACGGACGGG GGGCCCACGT TTGGATTACG GCTTCGCCGC TCTTTGACCA CGCGGGCAAA CTGGTCGGGG CCATCGAGTC GGTCCGCGAT ATTTCGGACC ACAAGCGGGC ACAAGAGGAA ATCAGGACCC AGAAAGCCTA CTTCGAACAG CTTTTCGAAA ACTCGCCCCT GGCCATCGTC ATGTTCGACA ACCGGGAGCG GATCATCAGC GCCAATCGGG GATTTCAAAA CCTCTTTCAG TACTCCGCCG AGGAGGTCAC CGGCCGCCCG ATCGATGAGA TCGTCACCCC CCCGGAGTTG TCCGATGAAG GTGCCGCTTT CTCGCGTATT GTTTGTGAAG GGGGAATTGT GCAGGGCGAG TCGGTGCGCA AACGGAAGGA CGGCAGTCTG GTGGATGTGA GCCTCTTGGC GTTCCCAATT GTGGTCGACA ATCAACTGGT GGGCGCGTAC GCCATATACA ACGACATCAC GGCACGCAAG CAGGCGCAGG CGGCGCTGCA AGAAAGCGAG GAACGACTGA AAACGGTACT TGATTCCATT CAGAGCGGGG TGGTGGTCAT TGATGCGGAG ACACACGAGA TCGTAAGCGC TAACCGCGTG GCCGTTGAAA TGATCGGCTG TCCCGTGGAA GAAATCGTCG GTTCGGTCTG TCACCATTTC ATCTGCCCGG CCGAAAAGGG CGAGTGTCCG ATTACCGACC TTGGACAGAG CATCGACCAC TCAGAGCGCG TCTTGATCAG AAAGGGTGGC GAAATCGTAT CGATCATCAA AACCGTGGTG CCGGTGGTAT TCAACGGCCG CAGGCACCTC ATCGAAAGCT TTGTCGACAT CACGGCGCGC AAACAGGCGG AGGAGCAGTT GAGGAAGGCC AAGGCGCTTC TGGATGGGGT GCTGGATGCA ATTCCGGACG CCGTCGGGGT TCAGGATGCC GACCACCGCA TGATCCGCCT GAACCAGGCG GGATACCGGT TGTTGAACCT AACACCGGAA GAGATCAAGG GCCGGAAGTG TTACGAGCTG TTTGGACGTT CAAACAGGTG CCGGCCGTGC GCCACCGAGA AGGCCTGGCG GACGAAACGG CTGGAAAGAG TAGAGAAGTA CATCCCCGAA CTGGACCGTT ACCTGGACTG CCGCAGCAAC CCTGTGACTG ACGAGAACGG CGAGATCATC ATGGTGGTGG AGCAGTTCTA CGATATAACC GAGCGCCGAC GGATGGAGGA ACAATTACGG CACCTCAGTC TGCACGATCC GCTGACCGGG CTCTACAACC GGAACTACTT CGAGCGGGAG ATGCGCCGCG CCGAGGGGAT GCGCCAGGTT CCGGTCGGCA TTATCGTCTG CGACGTGGAC GGGCTGAAAC TGGTGAACGA CACCCTGGGG CACGACGCCG GGGACGCTCT ACTCGTGGCC ACCGCCGGGG TGCTCAAGAG GTCCTTTCGC CCGGGCGACA TGGTCGCCCG GGTCGGCGGT GACGAGTTCG CCGTACTGCT CCCCGGCAGC GGCCGAGACG TCGTGGAAGA GGCGGGCAAC CGCATCCGGG AAGCGGTCGA GACCTATAAC GCCGCGAACC CCGGGATGGC CTTAAGCGTC TCCGTCGGTT TTGCCGTGGC TGACGAGTCG CCGGTGAATG TGAACGAGCT CTTCCGGGAA GCGGACAACA ACATGTACCG TGCCAAGCTG CACCGCAGCC GGAGCGCCCG CAGCGCCATC GTCCAGACCC TGATGAAGGC GCTGGAGGCC CGCGATTTCA TCACCGAGGG TCACGCCGAC CGCCTGCAAG CGCTGGTCGT TTCCATGGCG GCGGCGCTCG AGCAGCCCGA ACGAAGAATA GCCGACCTCC GCCTTCTGGC CCAGTTCCAC GACATCGGCA AGGTAGGGAT ACCCGACCGC ATCCTCTTCA AGGCCGGACC CCTGACTCCG GAGGAAGTCG CCGAGATGCG GCGGCACTGC GAAATCGGCC ACCGGATCGC GCTTTCAGCG CCCGACCTGA TCCCCATTGC GGACTGGATC CTGAAGCATC ACGAGTGGTG GAACGGTGAG GGATACCCGC TCGGCCTCAA GGGGGAAGAA ATCCCATTGG AGTGCCGCAT TTTGGCCATT GCCGACGCCT ACGACACCAT GACTAATGAC CGCCCCTACC GGAAGGCGAT GACTCACAGG GAAGCAATAA CCGAACTGAA AACGTACGCC GGGATCCAGT TCGACCCGGC GTTGGTAGAG GTGTTTGTGC AGCTGTTTGA CCAGCAGGCG GCGCCACCGG ACTCAACCGG CTTCTAG
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Protein sequence | MRSSGEIGLF QELVDLEDVQ RLQADFSAAT GLATSILDPS GRVLTNSGWS DLCTVFHRRS PAGAARCRES DRRILAGVAQ KQGEVIQVCA NGLVMAATPI VVAGRHLATI VLSQVFFEPP DEDYFRSQAR TLGLEEEPYL EAVRRIRVLP KEEFLPKLRF IGNLAGLISN QGQRNWEQKA LEDELRRERA HLQAIFQGSG SGMRIIGTDY RIVQQNQEME RLSGVPGQEA VGQKCFKSFH HAYCGTADCI LHRILAGEER VRLEVEKTRP DGRRIDVSLI ATPLKNAAGE IVGVIESFQD ITERKLMEER LRTSQNILNM VFNNVYDAIF IHAPDGRIID VNRKMLEMYG VERDQALTLS IRDDYSGPDN PLDRLPVMWN KVVAGEPQLF EWQARRPGDG SVFDVEVFLC KLVLNGDDVI LATVRDITER KRNQKALQDS HEELETANEE LVAVNEELVA AEEELRDQLE ALEKSRKALE AANRQLADII EFLPDATFVV DRDRKVVAWN RAMEELTGVR KEAIIGQGDY ACATPLYGKR RPILVDLIFG RVGADLEKHY EYIKRKGNTL YAEAFMPMVK NGRGAHVWIT ASPLFDHAGK LVGAIESVRD ISDHKRAQEE IRTQKAYFEQ LFENSPLAIV MFDNRERIIS ANRGFQNLFQ YSAEEVTGRP IDEIVTPPEL SDEGAAFSRI VCEGGIVQGE SVRKRKDGSL VDVSLLAFPI VVDNQLVGAY AIYNDITARK QAQAALQESE ERLKTVLDSI QSGVVVIDAE THEIVSANRV AVEMIGCPVE EIVGSVCHHF ICPAEKGECP ITDLGQSIDH SERVLIRKGG EIVSIIKTVV PVVFNGRRHL IESFVDITAR KQAEEQLRKA KALLDGVLDA IPDAVGVQDA DHRMIRLNQA GYRLLNLTPE EIKGRKCYEL FGRSNRCRPC ATEKAWRTKR LERVEKYIPE LDRYLDCRSN PVTDENGEII MVVEQFYDIT ERRRMEEQLR HLSLHDPLTG LYNRNYFERE MRRAEGMRQV PVGIIVCDVD GLKLVNDTLG HDAGDALLVA TAGVLKRSFR PGDMVARVGG DEFAVLLPGS GRDVVEEAGN RIREAVETYN AANPGMALSV SVGFAVADES PVNVNELFRE ADNNMYRAKL HRSRSARSAI VQTLMKALEA RDFITEGHAD RLQALVVSMA AALEQPERRI ADLRLLAQFH DIGKVGIPDR ILFKAGPLTP EEVAEMRRHC EIGHRIALSA PDLIPIADWI LKHHEWWNGE GYPLGLKGEE IPLECRILAI ADAYDTMTND RPYRKAMTHR EAITELKTYA GIQFDPALVE VFVQLFDQQA APPDSTGF
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