| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0135 |
|---|
| Symbol | |
|---|
| ID | 6025432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 150441 |
|---|
| End bp | 152177 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641592991 |
|---|
| Product | aldehyde ferredoxin oxidoreductase |
|---|
| Protein accession | YP_001716335 |
|---|
| Protein GI | 169830353 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGGAG AACGGGTCTT GACTATCCTG CACCTCGATC TGGACCGTCT GACCTGGAAG
ACGGAGACGC GCGCCGACCT GGCGGGCTAC CTGGGGGGGA TCGGCCTGGC GAGCAAGCTT
TTTGCCGAAT TATGGCGGCC GGGGCTCAAG CCCTTGGACC CGGCCCAGCC CGTGGTGCTG
GCCATCGGGC CGCTTTCCAC CGTGTTTCCC CTGGCGACCA AGACGGCGGC CGTGTTTCAC
TCGCCGTTGA CGGGGGAGTG GGGCGAGAGC TACGCCGGGA TGCGGCTGGC CTTGGCGCTC
CGGTTCGCGG GCTACGACGC CCTGGTCGTC ACCGGGCGGG CCGCGCACCC GGTCTACGCC
TCGGTTACGC CGGGCCGGGT GTCCTTCCGG GACGCGCGGG GCCTCTGGGG CCTTTCCACC
GAGGAGACCG GGCGCATTCT GCGGGAGTGG GAGGCGGGGC GGGGGCACCG CAGCACGGTC
CGAATCGGGC CGGCCGGGGA GCGGGGCGTA GCCTTCGCCG GGGTGAACGT GGACACCTTC
CGCCATTTCG GACGCCTGGG CCTGGGTGCC GTGTTCGGCG CCAAGAAACT CAAGGCGCTG
GTGGTTTACG GAGACAAGAG TTTTCCGATC CCGGACCGCA AAGCCTACCG GGCGGTGTAC
GACGAGGTGT TCCGGCGGGC GGTGGAGACC GACCTGTTGG AGAAGTACCA CGGGCTGGGC
ACGGCGGGAA ACGTCATGGT GCTCGACGGG CTGGGCGCCC TGCCCACCAG GAACCTGCGG
CAGAACCGGT TCGAGCACGC CGCGCGGATC AGTGGCGAGG CGTTCGCTGA GCAAACTTTG
CTCCGCAAGC TGGCCTGTCC CGGCTGCCCG GTGGGCTGCA TCCACATCGG GCTGTACCGG
CGGCAGTTCG GCACCGGTTA CGAATACGAG AGCATCGCGC TGGCCTACGA CCACGAATTG
ATCTACGCCC TGGGGTCGCT GCTGGGCATC GGCGATACCG ACGGTGTGTA CGCCCTGATC
GAGAAGGTAG AGCTTTTAGG CCTGGACGCC ATCACCAGCG GGGTGCTGCT GGCCTGGGCC
ACCGAAGCTC TCCAAGAAGG ACTGATCAGC GCGGAGGAAC TGGGGGTGCG GCTGGCCTTC
GGAAAGCCGG ACGGTTACCT GGCTGCCCTG GACCGGGTGG TTCGCCAGCC GAACGACCTG
TACCGGACTT TGGCCCGCGG GCTGGAAGCC GCGGCGCGCA CTTACGGGGG CCGCGACTTC
GCGCTGACCT TGGGCGGGCA CGAGATGGCC GGCTACCACA CCGGGTACGG GTTCCTGCTG
GGCCAAGCCG TGGGTGCGCG GCACTCGCAC CTGTGCAACG CCGGGTACGC GGTGGACCAG
GACCTCGGTC CCGATTTCGA CCCCGACGTC TTGGTGGAAC GCCTGATCGC CGAGGAGAAG
TGGCGCCAGG TGTTAAACAG CCTTTGCATC TGTCTGTTCG GTCGCGGGGT GTGGGACCGG
GATACGGTGC GGGCGGCGTT GGAAAGCCTG GGGATCGAGG CCGGGGGGGA TTTCCTTTCA
GCCCTCGGTG ATCGGGTCTT CAAGCTTAAG AACGAAGTCA AGCAGGAAAT GGGCTTTGAC
TTCCGCAAGC TGCGGTTCCC GCGCCGCTGC CTGGAGACCC CCTCTTTCCA GGGGCGCCTG
GACGAGGCGG TGCTCAAAGA CCTCCTGGAA CGGTACATCA GGAAAGCCGG CGTATAA
|
|---|
| Protein sequence | MPGERVLTIL HLDLDRLTWK TETRADLAGY LGGIGLASKL FAELWRPGLK PLDPAQPVVL
AIGPLSTVFP LATKTAAVFH SPLTGEWGES YAGMRLALAL RFAGYDALVV TGRAAHPVYA
SVTPGRVSFR DARGLWGLST EETGRILREW EAGRGHRSTV RIGPAGERGV AFAGVNVDTF
RHFGRLGLGA VFGAKKLKAL VVYGDKSFPI PDRKAYRAVY DEVFRRAVET DLLEKYHGLG
TAGNVMVLDG LGALPTRNLR QNRFEHAARI SGEAFAEQTL LRKLACPGCP VGCIHIGLYR
RQFGTGYEYE SIALAYDHEL IYALGSLLGI GDTDGVYALI EKVELLGLDA ITSGVLLAWA
TEALQEGLIS AEELGVRLAF GKPDGYLAAL DRVVRQPNDL YRTLARGLEA AARTYGGRDF
ALTLGGHEMA GYHTGYGFLL GQAVGARHSH LCNAGYAVDQ DLGPDFDPDV LVERLIAEEK
WRQVLNSLCI CLFGRGVWDR DTVRAALESL GIEAGGDFLS ALGDRVFKLK NEVKQEMGFD
FRKLRFPRRC LETPSFQGRL DEAVLKDLLE RYIRKAGV
|
|---|
| |