Gene Daud_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0125 
Symbol 
ID6025406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp135205 
End bp136182 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID641592978 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_001716325 
Protein GI169830343 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000298422 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTT CCGTGCTGGA GTACCTGAAG ACAAGCCCGA GTTACGTTTC CGGGGCGGAG 
ATTTCCCGGA AACTGGCTAT TTCACGGACG GCGGTCTGGA AGCACATCCG GGCCCTCCGG 
GCGGAGGGTT ACCGGATCGA AGCCCGTTCC CGCCTGGGCT ACCGCCTGCT GGCGGTACCT 
GACCTGGTGA GCCCGGAAGC GGTTCAGCCC GGTCTGGTCA CGGTCTTTTG CGGCCGGAAC 
TATCTGTACC ACCCCACCCT TTCTTCCACC AACGATCAAG CCAAGGAGTC GGCCCGGCGA 
GGGGCCCCCG AGGGAACTAC GATCGTGGCC GAGGAACAGT CGGGCGGCCG GGGCCGCCTG 
GGCCGGAGCT GGCATTCGCC CCGGGGCGGG CTTTGGTTCT CGGTGGTACT CCGCCCGCCC 
CTGCCGCCGG CGCGGGCCCC GGAGGCCGTG TTTGTGGCGG CAGTGGCCGG GGTGGAGGCG 
TTGGCCGCTT ACCCCGGCGT CCAGGTCGGG CTGAAATGGC CGAACGACTT TGTCTGGCGT 
GGCAGGAAGC TCGGTGGGAT TCTGACCGAG GTGACCGGCG AACTGGACCA GATCAACCAC 
CTGGTGGTGG GCATAGGGTT GAACGTCAAC CTCGATCTTC AGGACTTCCC GCCCGAACTC 
CGGACCGGAG TCACCTCCGT CCGGGAGATC ACCGGGGGAG ACGTTTCCCG GTCCGAGCTT 
CTACGGCAGC TGCTGGCCGC TCTGGAGCAC TGGTACCTGG TCTGGTTGAA GCAGGGATTC 
ACTCCCGTAC TGGCGGCCTG GAAAAGGCAC AACGCCTGCC TGGACCGCCT GTTGCGGGTT 
TTGACCCCCG AAGGCGAACT GGTAGGCCGC GCGGTGGATG TGGACGCGGA CGGGGCTCTC 
TTGCTGGCCA CCGCCGGGGG AGTCCGGAGA GTGGTCACCG GGGAGTTGCA GGTGGAGGGG 
GATAGATGGA CAACGTGA
 
Protein sequence
MKSSVLEYLK TSPSYVSGAE ISRKLAISRT AVWKHIRALR AEGYRIEARS RLGYRLLAVP 
DLVSPEAVQP GLVTVFCGRN YLYHPTLSST NDQAKESARR GAPEGTTIVA EEQSGGRGRL 
GRSWHSPRGG LWFSVVLRPP LPPARAPEAV FVAAVAGVEA LAAYPGVQVG LKWPNDFVWR 
GRKLGGILTE VTGELDQINH LVVGIGLNVN LDLQDFPPEL RTGVTSVREI TGGDVSRSEL 
LRQLLAALEH WYLVWLKQGF TPVLAAWKRH NACLDRLLRV LTPEGELVGR AVDVDADGAL 
LLATAGGVRR VVTGELQVEG DRWTT