Gene Daud_0109 details

Gene Information

• Locus tag: Daud_0109
• ID: 6025676
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 115584
• End bp: 117554
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641592962
• Product: NADH dehydrogenase (quinone)
• Protein accession: YP_001716309
• Protein GI: 169830327
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; [COG3411] Ferredoxin

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCTGC AGGTCGACTC CCCGGCCCGG CTGGCGGAGG TTCGAAAAGT CTGCGAAAGC 
GCTTTCGCGC GACAAAAATC CCGGTTTTTG GTCTGTGCCG GCACCGGTTG CGTTCTTGGC 
GGCGCCCTGG AAGTTTACCA GGAGTTTGTG CGCTTGCTTA AGGAAAGAGG CTGTCCGACC 
AGCGTGGAAC TGCTTTTTGA AGGCCGGGAA ACGGATGCCG GCGCCGCCTA CAGCGGCTGC 
CATGGTTTTT GCCAGTTAGG CCCCCTGGTG CGGTTTGAAC CGAAGGGTAT TTTTTACACG 
CAGGTAACGG CGGCCGACGT TCCAGAAATC ATCACCACCG CGCTGGATAA GAATACGGTG 
GTGGAGCGCC TGCTTTACCA GAACCCGGAC GGGAGCAAAA GCCTACGGGA AGAGGACGTG 
CCTTTTTACC GCCACCAGCA AAGGGTGGTC CTTGCCTACT GCGGCCTGAT CAACCCGGAA 
GACATCCGCG AGTACTTTGC CATCGGCGGA TACCAGGCGT TGGCCGACGT GCTCACCCGG 
TACACCCCGG AAGAAGTAAT CGACGCCGTC ACCCGTTCGG GCCTGCGCGG CAGAGGCGGG 
GCCGGTTTCC CCACCGGGAG AAAGTGGGCG GCCGCCCGCC GGGCCGAAGG GGAACCGAAG 
TACGTGGTCT GCAACGGCGA CGAAGGAGAC CCGGGTGCCT TTATGGACCG TTCCGTCCTG 
GAGGGAGATC CCCACTCGGT TCTGGAGGGT ATGACCATTG CCGCCTATGC CGTCGGCGCC 
GGCCACGGTT ATATCTACGT CCGTGCGGAA TACCCGCTGG CGGTGGAACG CTTAAAAATC 
GCCATTGCGC AGGCCAGGCA ACACCGGGTG CTGGGACAGG ACATTATGGG CACCGGATTC 
AACTTCGACA TCGAGATCTT CCGGGGCGCC GGCGCCTTTG TCTGCGGCGA ATCGACGGCT 
CTGGTCCGCT CCCTCGAAGG CTTCCGGGGA ATGCCCAAAG CGATGCCCAG GCCCCGCACA 
ACCGAAGAAG GCATCGGCGG CAAGCCCACG CTGCTGAATA ACGTCAAATC ATTCGCCTAC 
GTGCCCCAGA TTATCACCAG GGGTCCGGAG TGGTTTGCTT CCATGGGAAC CGAAACCAGC 
AAGGGAACAG CTGTTTTTGC CCTAACCGGA AAGGCCAAAA ACACCGGCCT GATCGAGGTC 
CCCATGGGAA TAACGCTGCG GGAAATAATT TTCAACATCG GCGGCGGAAC GTCCACCGGC 
CAGGAGTTCA AGGCCGTGCA AACGGGCGGT CCTTCCGGCG GCTGTCTGCC CAAAGAACTG 
CTGGATATGC CGGTGGACTT CGACTCCCTG ACGAGCGCGG GATCCATGAT GGGCTCAGGC 
GGCATGGTGG TCATGGACCA GGATACCTGC ATGGTGGACG TGGCCAGGTA TTTTCTGGAG 
TTCACTGTCA ACGAATCCTG CGGCCAGTGT ACACCCTGTA GGGTAGGTAC TTACCAGATG 
CTTAAAATTC TGGAAGATAT CACCCAGGGA CGCGGCAAAC CAACCGACCT CTCCTTGTTA 
GAAGACATAG GAAAGGCAAT TATTGCCGGT TCCATCTGCG GCCTGGGCCA AACCGCCCCC 
AACCCGGTGT TGAGCACGCT GCGCTACTTC CGTTCAGAAT ACGAAGCGCA CATCGGTGAA 
AAAAGTTGCC CTGCGCTGTA CTGTAAGGAA TTAATTGCCT ACTGGATTGA TCCTGACAAA 
TGCGCCGAAC CCTGTCGACT CTGTTTGGAA AATTGCCCTA TGGAAGCAAT CGTCGGCAAA 
TGGAGGGCTA CGCCGGTGAT TATTCAGGAA AAGTGCATCA AGTGCGGCGG GTGTTTTGAC 
GTGTGCCCGG ATAAATACAG AGCGGTAAGA AAGGTCACCG GACCGGAAAG GTTAAACCTC 
CTTGAGAGGG GCTTGCCGGC AAGGGGGAGG AATGGAAATG GAGGCGGTTG A 

 

Protein sequence

MMLQVDSPAR LAEVRKVCES AFARQKSRFL VCAGTGCVLG GALEVYQEFV RLLKERGCPT 
SVELLFEGRE TDAGAAYSGC HGFCQLGPLV RFEPKGIFYT QVTAADVPEI ITTALDKNTV 
VERLLYQNPD GSKSLREEDV PFYRHQQRVV LAYCGLINPE DIREYFAIGG YQALADVLTR 
YTPEEVIDAV TRSGLRGRGG AGFPTGRKWA AARRAEGEPK YVVCNGDEGD PGAFMDRSVL 
EGDPHSVLEG MTIAAYAVGA GHGYIYVRAE YPLAVERLKI AIAQARQHRV LGQDIMGTGF 
NFDIEIFRGA GAFVCGESTA LVRSLEGFRG MPKAMPRPRT TEEGIGGKPT LLNNVKSFAY 
VPQIITRGPE WFASMGTETS KGTAVFALTG KAKNTGLIEV PMGITLREII FNIGGGTSTG 
QEFKAVQTGG PSGGCLPKEL LDMPVDFDSL TSAGSMMGSG GMVVMDQDTC MVDVARYFLE 
FTVNESCGQC TPCRVGTYQM LKILEDITQG RGKPTDLSLL EDIGKAIIAG SICGLGQTAP 
NPVLSTLRYF RSEYEAHIGE KSCPALYCKE LIAYWIDPDK CAEPCRLCLE NCPMEAIVGK 
WRATPVIIQE KCIKCGGCFD VCPDKYRAVR KVTGPERLNL LERGLPARGR NGNGGG