| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0089 |
|---|
| Symbol | |
|---|
| ID | 6027036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 92094 |
|---|
| End bp | 93794 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641592942 |
|---|
| Product | formate--tetrahydrofolate ligase |
|---|
| Protein accession | YP_001716289 |
|---|
| Protein GI | 169830307 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.985231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTTA GGACGGACCT GGAGATCGCC CAGGCGCACC AGATGATACC CATTACCGAT
CTGGCAGCTT CAATCGGCCT GTCGGAGGAA GACATTGACC TGTACGGGCG GTACAAGGCC
AAGATCGGCC TGCATGTACT GGAAAAGTTC AAGGAACGAC CGGCCGGCAG ACTGATCGAC
GTCACGGCCG TCACCCCCAC CCCTCTTGGC GAAGGAAAAA CCCTGACCAC CATCGGATTG
ACTCAGGGTC TAGGCCGGAT CGGTAAACGG GCGGCCTGCA CCCTGCGCCA GCCTTCCATG
GGCCCGGTGT TCGGGATCAA AGGCGGTGCC GCCGGGGGCG GGTACGCCCA AGTGGTGCCC
ATGGAGGACC TTAATCTGCA TTTCACCGGC GACATCCACG CGGTGGGGCA GGCCCACAAC
CTGCTGGCCG CCATGCTCGA CGCCTCGCTT TATCACGGCA ACCCGCACGA TATCGACCTG
CACACGATCA CCTGGACACG AGTCATGGAC GTGAACGACC GGGCCCTGCG GGACGTGGTG
GTGGGCCTGG GGGGACCGGT CAACGGCTAT CCCCGGGAGG CTGCCTTTGA AGCGACGACC
GCTTCGGAGG TCATGGCCGT TCTCGCGCTT GCCGACGGCA TCCAGAACCT GCGCCAGCGC
CTGGGGCGGA TAGTGGTGGG CTTCAACCGA AAAGGCCACC CGGTCACGGC CGAGGACCTT
CAGGGTGCCG GGGCGATGGC GGTGATTCTC AAGGAAGCGG TCAAGCCCAA CCTGATTCAG
ACGCTGGAGG GACAGCCCTG CATCGTGCAC GCCGGACCGT TCGCCAACAT CGCCCACGGG
CAGTGTTCGG TGCTGGCCGA CCGGATGGCG TTGAAACTGG TCGATTACGT GGTGACCGAA
AGCGGGTTCG GCGCGGACCT GGGAATGGAA AAATTCATGG ACATCAAGTG CCGGCAGTCG
GGGCTCCGGC CCGACTGCGT GGTGGTCACC TGCACGATAC GGTCCCTGAA GATGCACGGC
GGTGTCGGCC GGATCATCCC CGGCAAGCCC CTGCCCGAGG AGATCAGGCG GGAGAACCCG
GCCGCGGTCG CGGAGGGGTG CCGAAACCTG GCGCACATGA TCAAAATCGC CCACTATTAC
GGGGTGCCGG TGGTGGTCGC CGTGAACCGT TTCCTCGAGG ATACGGACGC CGAGGTTGAG
ACCGTGCTCC GGGAGGCGGT GCGCGCCGGG GCCCTGAGCG CGCATCCGGT CACCGCCTGG
GCGGAAGGCG GGGCGGGAGC CGTCGACCTC GCCGCCGGTG TTGTGTCGGC CTGCGAGCGG
GGCGGGGAGT TCCGCCTGCT TTATCCGGAT GAACTGTCAA TCAAGGAAAA AATCGAGGTG
CTCGCCCGGC GGGTCTACAA CGCGGACGAG GTGGCCTACG AGCCCCTGGC CGAGAAAAAG
ATCGCCCGCT TCGAAGAACT GGGCTGGGGG CGGCTACCGA TCTGCATGGC CAAGACGCAC
CTGTCCATCT CCCACGACCC CATGCTGCGG AACGTACCTT CGGGGTATGT GTTTCCGATC
CGGGACATCC GGGTATCGCT CGGCGCTGGG TTTTTGTATC CCTTGGCCGG GGCGATGCTT
ACCATGCCCG GCCTGCCCTC CCGGCCCGCC GCCTTCGGGA TTGATATCGA CGAGCGCGGA
CGGGTAAAGG GGCTGTTTTG A
|
|---|
| Protein sequence | MTFRTDLEIA QAHQMIPITD LAASIGLSEE DIDLYGRYKA KIGLHVLEKF KERPAGRLID
VTAVTPTPLG EGKTLTTIGL TQGLGRIGKR AACTLRQPSM GPVFGIKGGA AGGGYAQVVP
MEDLNLHFTG DIHAVGQAHN LLAAMLDASL YHGNPHDIDL HTITWTRVMD VNDRALRDVV
VGLGGPVNGY PREAAFEATT ASEVMAVLAL ADGIQNLRQR LGRIVVGFNR KGHPVTAEDL
QGAGAMAVIL KEAVKPNLIQ TLEGQPCIVH AGPFANIAHG QCSVLADRMA LKLVDYVVTE
SGFGADLGME KFMDIKCRQS GLRPDCVVVT CTIRSLKMHG GVGRIIPGKP LPEEIRRENP
AAVAEGCRNL AHMIKIAHYY GVPVVVAVNR FLEDTDAEVE TVLREAVRAG ALSAHPVTAW
AEGGAGAVDL AAGVVSACER GGEFRLLYPD ELSIKEKIEV LARRVYNADE VAYEPLAEKK
IARFEELGWG RLPICMAKTH LSISHDPMLR NVPSGYVFPI RDIRVSLGAG FLYPLAGAML
TMPGLPSRPA AFGIDIDERG RVKGLF
|
|---|
| |