| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0084 |
|---|
| Symbol | |
|---|
| ID | 6026952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 84737 |
|---|
| End bp | 85702 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641592937 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_001716284 |
|---|
| Protein GI | 169830302 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.426171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTGGT GTACACTATT ATTGTCAGGG CTGATAAGTA CCGGCACCCG GGAGGGAAAG
CAGTTGACTA CCTTGGTCGG CGTGATCGAC ATCGGCACCA ACTCCACCCG GCTGTTAATC
GCCCGGGTAT CGGCCAAAGG GCGGCTGGAC GTCGTCCGGA CGGCGTTGAC CACCACCCGC
CTGGGTGAAA GTTTGGCCGG CGGCGTGCTC CTGGACCGGG CCATGGCCCG GACGATCGAC
TGCCTGGTCG GGTACCGGGC GGCGCTTGCC GAATACGGGG CGGACGAGGT GGTGGTGGCG
GCCACCGCGG CCGTCCGCGA GGCGGCCAAC CGGGACGAAT TCCTGAGGCG GGTGATGGAC
GCCACCGGCT TCAAGGTGCG GGTGCTCTCC GGGCCCGAGG AGGCGGCCTA CGGATTCCTG
GGGGTGGTTT CAGGCCTGGA CCTGGACCCG GCCGATATTG TGGTCGCCGA TGTCGGGGGG
GGCAGCACCG AGTTTGTCTG GCTCGAGGAA GGGTCGCCGG CCTGCCGGAG CCTGCCCGTC
GGCGCGGTGC GGATGACCGA GAAGCCCCAC ACCGACGCCG AAATCGCCGC CCTGATCCGC
CCGCTGGTGG ACGAGATGCG CGGGCGGGAC GCCCGGCAAC TGGTGGGGGT GGGCGGGACG
GTCACCACCC TGGCGGCCAT GGTGCTCGAA CTGGACGTCT ACGACCCGGA GCGGGTCCAC
GGTATGAAAC TGGACCGGGC AGCGGTCCAC CGGCTCTCGG TGCGCCTGGA GGCAGCCGGA
CTGGCCGAGC GGAAACGCAT GCCGGGACTG CAGCCGGAGC GGGCCGACAT TATCCCGGCC
GGGGCACGGA TCGTGCATTG CATCATGCAG GTGCTTGAAG CGCCCGACCT GATCGTGAGC
GAGGCCGACA TTCTTCACGG ACTGGCTCTG TACGGTCATC CGGTTGTCGA AAGAAAAACG
GAGTAG
|
|---|
| Protein sequence | MSWCTLLLSG LISTGTREGK QLTTLVGVID IGTNSTRLLI ARVSAKGRLD VVRTALTTTR
LGESLAGGVL LDRAMARTID CLVGYRAALA EYGADEVVVA ATAAVREAAN RDEFLRRVMD
ATGFKVRVLS GPEEAAYGFL GVVSGLDLDP ADIVVADVGG GSTEFVWLEE GSPACRSLPV
GAVRMTEKPH TDAEIAALIR PLVDEMRGRD ARQLVGVGGT VTTLAAMVLE LDVYDPERVH
GMKLDRAAVH RLSVRLEAAG LAERKRMPGL QPERADIIPA GARIVHCIMQ VLEAPDLIVS
EADILHGLAL YGHPVVERKT E
|
|---|
| |