Gene Daud_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0058 
Symbol 
ID6027439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp62797 
End bp63717 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content65% 
IMG OID641592911 
Product4-diphosphocytidyl-2C-methyl-D-erythritol kinase 
Protein accessionYP_001716258 
Protein GI169830276 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCCG TACAATTCAT TAGTCAAGCC GCAGGGCGTT TAAGGCTTCA ATGGGGGGAC 
TATCCGATGC GTCTCTCGGC CTATGCCAAG ATTAACCTGG TACTGGCCGT GGGCGGCCTT 
CGTCCCGACG GCTACCACGA AGTGGAGACC GTCCTGCAGC AACTGGAACT GCATGACCGG 
CTGGAGTTGC GGCAAGCCGA GCAATTTACC CTGTACACCG ACAGCGCGGA GGTGCCTCAT 
GGCCCCGGGA ACCTGGTCTG GGAGGCGGCC GCGCTGTTGC GGGAACGTTT CCGTTGTCCG 
TTCGGGGCCG ACATCCGGTT GTACAAGTCC ATCCCGGTGG CCGCCGGTCT GGGCGGCGGT 
TCAGCGGATG CCGCCGCCAC CCTCGTGGGA TTGAACGAAC TCTGGAACCT GAATCTGGAT 
CTTGAGACGT TACTCGGCCT CGCGGCCGAA CTCGGTTCCG ATGTGCCGTT TTTTCTGGTT 
GGGCCGACCG CCCTGGCCCG GGGGCGGGGG GAGATTCTTG CCCCTCTGCC GCCGGCCCCG 
GAGATGGGGG TGGTGCTGGT CACGCCGGCT TTCGGTGTAC GGGCGGCGGA AGCCTACGCT 
CACTTTGACC GCCTTCCCGG CGGCGCACCC CCGGATCTGA CTCCGGTACT CCGGGCTCTG 
GCCGAAAAAG ACCGGTACGC TGTGGCCCAG GGGCTGTTCA ATGGATTGGA GGCGGCCGTC 
TTCGACCTAT ACCCTGAAGT CCGCGCGTTG AAAAAAGAGC TCGGCAAAGA AGAGGGGGTG 
CTGGGGGCGT TGGTGTCCGG CAGCGGCCCG ACGGTGTTCG GACTGACCGC GGACGTGGAG 
CAGGCGGAGG TTGTGGCCGC CAGGCTTCGC TCCCGGGGAC TTCCGGCACG GGCGACAAAA 
ACGCGCGGGC CCTCGAGTTG A
 
Protein sequence
MRAVQFISQA AGRLRLQWGD YPMRLSAYAK INLVLAVGGL RPDGYHEVET VLQQLELHDR 
LELRQAEQFT LYTDSAEVPH GPGNLVWEAA ALLRERFRCP FGADIRLYKS IPVAAGLGGG 
SADAAATLVG LNELWNLNLD LETLLGLAAE LGSDVPFFLV GPTALARGRG EILAPLPPAP 
EMGVVLVTPA FGVRAAEAYA HFDRLPGGAP PDLTPVLRAL AEKDRYAVAQ GLFNGLEAAV 
FDLYPEVRAL KKELGKEEGV LGALVSGSGP TVFGLTADVE QAEVVAARLR SRGLPARATK 
TRGPSS