Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0051 |
Symbol | |
ID | 6027225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 56360 |
End bp | 57262 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641592905 |
Product | Allergen V5/Tpx-1 family protein |
Protein accession | YP_001716252 |
Protein GI | 169830270 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | [TIGR02909] uncharacterized protein, YkwD family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000168583 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTCTG TGAACAAAAA GCTCGCCGTT GCAGTGGTAG CCCTGATGTT GTCCGTCGCC CTGTTGATTC CGGCCACCCT GGCCCACGCC AACGCACCTT CTGCGGAAGA AAGCAAGTTG ATCACGGGAA TAAACCAGGC CCGCCAGAAG GCGGGGGTTC AGCTTCTAAC CAATAGCGCC CGTTTGAACG AGGTGGCCCT GACCCTCCTG ACGAACGGAA CCAGCGTATC GCTGGCGTTG CGGGAGCAAG GAATCACCTA CCGGTCCGCC TGTACGCTGC GTGTAGGCTC CGGCAACGCG GATCTGGTGG TCCGGGCTTT GACCGGATAC AGCTCGTCAC AGGTCTTGCA GCCGCAGTAC AATCAGATCG GTGTAGCTAT CCGGAATAAC ACCACGGTGA TCGTTCTAAT CAACGGGGTT ATTGCCGCGC AGCCGGCACC GCAAACGGCC CCGACTCCGG CACCGCAACC CGCGCCGTCG CCGGCTCCCA TGCCGTCACC CGGCCCCTCC GGTTTGATGA CCGCGTACGA GATGAAGATA GTTGAACTGG TGAACGCCGA GCGGGCTAAG CTCGGACTGA GGGCTCTGGC GGTTGACGCC AAGCTGTCGC AAGTGGCCCG ATTAAAGTCC GAGGACATGC GGGACAAGCG CTATTTTGCC CATCAATCTC CCACCTACGG TTCGCCGTTT GACATGATGA GACAGTTCGG AATTACCTAC CGCACGGCCG GTGAGAATAT CGCCGCCGGC CAGCGTACCC CGGAAGAAGC CATGCGTGGG TGGATGAACT CCTCCGGGCA CCGGGCCAAT ATCCTGAACC CCAATTTCAC TCACATCGGC GTTGGGCATG TGGTCGGCGG GAGCTACGGC AACTACTGGA CGCAGATGTT TATCGGCAGA TAG
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Protein sequence | MQSVNKKLAV AVVALMLSVA LLIPATLAHA NAPSAEESKL ITGINQARQK AGVQLLTNSA RLNEVALTLL TNGTSVSLAL REQGITYRSA CTLRVGSGNA DLVVRALTGY SSSQVLQPQY NQIGVAIRNN TTVIVLINGV IAAQPAPQTA PTPAPQPAPS PAPMPSPGPS GLMTAYEMKI VELVNAERAK LGLRALAVDA KLSQVARLKS EDMRDKRYFA HQSPTYGSPF DMMRQFGITY RTAGENIAAG QRTPEEAMRG WMNSSGHRAN ILNPNFTHIG VGHVVGGSYG NYWTQMFIGR
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