Gene Daud_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0041 
Symbol 
ID6027519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp47283 
End bp48833 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content62% 
IMG OID641592895 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001716242 
Protein GI169830260 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.367271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCTTGG GTAAACCGCC TTTTTACATC ACCACGCCCA TCTACTACCC GAGTGATAAT 
CTGCATATCG GGCACGCCTA CACGACGGTG GCCGCGGACA CCGTGGCCCG GTTCAAGCGG
CTGACCGGTT ACGATGTGTA CTTCTTGACC GGCTCGGATG AACACGGGCA AAAGATCGAG
CGCACGGCGG CGGCCCGGGG TAAAAACCCC CAGGAATACG TCGACGAGAT CGTGGCCGGT
TTCAAGCGCC TCTGGTCCCG GCTGGAAATC GACTACTCGG ACTTCATCCG GACCACCGAG
GACCGGCACA AGCGGGTGGT GACGGACATT TTCCGCCGCC TGCACGAACA GGGCGACATC
TACAAGTCGT CCTACGAGGG ACTGTACTGC ACCCCTTGTG AAGCCTTCTG GACCGATCGC
CAGGTCGTGG AGGGAAACTG TCCCGACTGC GGGCGTCCGG TCGAGCTGGT GGCCGAGGAG
AGTTACTTCT TCCGGCAGTC CCGCTACGCG GAACGTCTGC TTGCCCACAT CGATCGGAAC
CCTGATTTCA TCCAACCCGT TTCGCGACGG AATGAAGTGG TGAGCTTCAT TAAAATGGGT
CTGGAGGACC TGTGCGTTTC CAGGACCACC TTCAACTGGG GCATTCCGGT GCCGTTCGAC
CCCCGGCACG TGATTTACGT CTGGGTGGAC GCGCTGACGA ACTACATTTC GGCCTTGAAC
TACGGGGCCG AAGACGACTC GCTGTACCGG CGGTACTGGC CGGTGGACGT ACACCTGGTG
GGCAAGGACA TCGTTCGTTT CCACTGCATC ATCTGGCCGA TCATCCTCAT GGCGGCCGGA
ATTCCGCTAC CGAAACGGGT GGTCGGGCAT GGGTGGCTCA TGCTGGAAAG CGGGAAGATG
TCGAAGTCCA AGGGCAACGT CGTCGACCCG TTCGTGCTCA TCGACAGGTA CGGCGTGGAC
GCGATCCGGT ACTACCTGCT CCGGGAGATG CTCTTCGGCG CCGACGGTTA TTACTCCGAA
GACAACCTGA TCCGGCGCAT CAACGTGGAC CTGGCGAACG ACCTGGGCAA CCTTCTCAGC
CGGACCACGG CGATGATTGA CAAGTACCTG GACGGGGAAA TCCAGGCCCC CGGTCCGGCC
GACGACCCGC TGGACAGGGA GTTGATCGAC CTGGCCCTGA TCACCCCCGG CGAGGTGGCC
GGGCTGGTGA ACGAACTCGA CCTGTCAGCC GCCCTCGGGG CGATCATGAA ACTGGTCGGG
CGGGCGAACA AGTACATCGA GGAAACCGCG CCCTGGACCC TGGCCAAAGA CCCCGCAAAG
AAACAGCGTC TGGCCGGCGT AATGTACAAC CTGGCCGAGT CCTACCGGAT CGCCACCGTC
CTGCTGTCCC CCTTCATGCC CGGTTTCCCA GCCCGGGTGT GGCCGCAGCT GGGCATCGCC
GGCCGTCCCG AGCTGCACAC CTGGGAATCG CTCACTTGGG GCCGGTTGCC GGCGGGCACG
CGCATTGCGC GCGGGGCGCC GCTTTTCCCA CGTGTCGAGG TTCCGAAATA G
 
Protein sequence
MILGKPPFYI TTPIYYPSDN LHIGHAYTTV AADTVARFKR LTGYDVYFLT GSDEHGQKIE 
RTAAARGKNP QEYVDEIVAG FKRLWSRLEI DYSDFIRTTE DRHKRVVTDI FRRLHEQGDI
YKSSYEGLYC TPCEAFWTDR QVVEGNCPDC GRPVELVAEE SYFFRQSRYA ERLLAHIDRN
PDFIQPVSRR NEVVSFIKMG LEDLCVSRTT FNWGIPVPFD PRHVIYVWVD ALTNYISALN
YGAEDDSLYR RYWPVDVHLV GKDIVRFHCI IWPIILMAAG IPLPKRVVGH GWLMLESGKM
SKSKGNVVDP FVLIDRYGVD AIRYYLLREM LFGADGYYSE DNLIRRINVD LANDLGNLLS
RTTAMIDKYL DGEIQAPGPA DDPLDRELID LALITPGEVA GLVNELDLSA ALGAIMKLVG
RANKYIEETA PWTLAKDPAK KQRLAGVMYN LAESYRIATV LLSPFMPGFP ARVWPQLGIA
GRPELHTWES LTWGRLPAGT RIARGAPLFP RVEVPK