Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0035 |
Symbol | |
ID | 6027557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 41822 |
End bp | 43309 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641592889 |
Product | Orn/Lys/Arg decarboxylase, major region |
Protein accession | YP_001716236 |
Protein GI | 169830254 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.730375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGTAG GCAAAGGGGG GACTTTCGCG GTGAACCAGC GCCGGGCACC CCTGTTTGAA GCCCTGAAGC ACCACGTGAC CAGGAACTAC ACGGGCTTCC ACTTTCCGGG ACACGGCGGG GGCGCCGGTC TGCCCCGGGT TTTCCCCGCC GGCCGTGAAC TCTTCCGGTT TGATTTGACT GAACTGCCCG GACTGGACGA CCTGCACGCG CCCGCGGGCC CGATCGCCCG GGCCCAGGAG TTGGCGGCGG CTTTATACGG CGCCGACCGC ACTTTTTTCC TGGTGAACGG GAGCACGGCG GGGGTGCAGG CCCTCCTGCT GGCGGCTACG GCCCCCGGGG AAAAGGTGCT CCTGCCCCGG AACGCGCACC GCGCGGTGAT CGGAGGCCTG GTGCTCTCGG GGGCCGATCC GGTATACGTC ACGCCCCCCT TCGACGCCGA ATGGGGCTTT TTCCGGCCCC CGCGACCGGC AGACGTCCGG GCCGCCCTGC AGGCGCATCC CGACCTCCGG GCCGTACTCC TGACCCACCC GGACTACTAC GGTCAGGCCG TGGTGGATGC CGAAATGGCC GAAGTGCTGC GGGAGACCGG AGCTATTTTC CTGGCCGACG AGGCTCACGG GGCGCACCTG CCGTTCCACG CCGCCATGCC GGTGCCGGCT TTGAGGCTCG GTGCGGCGGC CGCGGCGCAG AGCTTGCACA AACTGGGCGG GGCCCTGACC CAGGCTTCTC TGCTGCATCT GAAAGGGACA GGCCTCTCCC CCGCGCGGGT GAGCCGGGCG CTGGCGCTGC TCCAGACCTC CAGCCCCTCA TACCTGCTGA TGGCCTCCCT GGATCTGGCC CGGCGCCAAC TGGCCGTCTC CGGAGGGCGG CGGTTCGGGC GGGCGGTGGA CCTTGCCGGC CGCCTGCGCC TGGGGCTCGC GGCGCTGGAT GGGGTGGAAG TTTTTGACGC CGGACCGGGC CGGGCCGACC CGACCAAGGT GATGGTGTCC ACCCGCGGCC TGGGTTTGAG CGGGCACCGA GCCGCCGCCG TGCTGCGGGA CAAACACTCG GTCCAGGTGG AGGCGGCCGG TTTCGGGCAC CTCTTGTTCG TGGTCGGGCT CGGGACGCGG GCCCCGGATA TTGCCCGGAC CCTGGGGGCT TTCCGGGCCC TGGCCCGGGA GCACGCCCCT TCCGACCTCC GCCGTCAGAC CTCCGGCCGC CGACCTCCGG CCTCCGACTT CCATTTATGG CCGGCACCCC CGGCCCCGAA GGTGCTCACC CCGCGGGAGA GCTGGTTTGC GCCCGCCCGG GCCGTGCCGG TCCGGGAAGC GTCCGGGCTG GTGGCCGCCG AAACGGTCAG CCTGTGCCCA CCGGGAATCC CGATCGTGTT TCCGGGTGAA AGACTCACCC CGGAGGTGTT AGAATATACT TTGGAGATTC GGGCCGGGGG AGTGGCGTTT CAGGCCGCCG ACCCGGGCTT GAAAACCATC ATGGTGCACG ACGGGTGA
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Protein sequence | MSVGKGGTFA VNQRRAPLFE ALKHHVTRNY TGFHFPGHGG GAGLPRVFPA GRELFRFDLT ELPGLDDLHA PAGPIARAQE LAAALYGADR TFFLVNGSTA GVQALLLAAT APGEKVLLPR NAHRAVIGGL VLSGADPVYV TPPFDAEWGF FRPPRPADVR AALQAHPDLR AVLLTHPDYY GQAVVDAEMA EVLRETGAIF LADEAHGAHL PFHAAMPVPA LRLGAAAAAQ SLHKLGGALT QASLLHLKGT GLSPARVSRA LALLQTSSPS YLLMASLDLA RRQLAVSGGR RFGRAVDLAG RLRLGLAALD GVEVFDAGPG RADPTKVMVS TRGLGLSGHR AAAVLRDKHS VQVEAAGFGH LLFVVGLGTR APDIARTLGA FRALAREHAP SDLRRQTSGR RPPASDFHLW PAPPAPKVLT PRESWFAPAR AVPVREASGL VAAETVSLCP PGIPIVFPGE RLTPEVLEYT LEIRAGGVAF QAADPGLKTI MVHDG
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