Gene Daud_0033 details

Gene Information

• Locus tag: Daud_0033
• ID: 6027450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 40842
• End bp: 41438
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641592887
• Product: recombination protein RecR
• Protein accession: YP_001716234
• Protein GI: 169830252
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00162242
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGTATT CCCGTTCGGT GGGCCGCCTG ATCGAGGAAC TGGCCAGGCT ACCGGGGATC 
GGCCCGAAAA CGGCGCAGAG GCTGGCTTTT CACCTGGTCA CTGCGCCGCG GGAGGCGGCC 
GAGAGCTTGA GCCGGGCTAT TCTGGAAGCC CGCGACAAAC TGGTGTTCTG CCGGGTGTGC 
GCCAACATCG CCGATGAGAA CCCGTGCGGC ATCTGCCGTG ATCAGAACCG TGACCACGGT 
CTGATCTGCG TGGTTGAACG GCCCCGCGAC GTCCTGGCCG TCGAAAAGGC GCACGGCTAC 
CGGGGACTCT ACCACGTTCT GAACGGCAGC CTGTCGCCGC TGCAGGGCGT GGGCCCCGAG 
GAGCTGAACA TCGCGGCCCT GGTAACGCGG GTCCGGGAAG GTACCGTCCG GGAAGTGATC 
GTGGCCACCA ACGCCACCGT GGAGGGCGAG GCCACGGCCC TGTACCTGGC CCGGCTGCTC 
CGTCCCCTGA ACGTCCGGGT TACCCGGCTG GCTTTTGGGC TGCCGGTGGG TTCCGACCTG 
GAGTATGCCG ACGGCCGGAC TTTGGCCCGG GCCATCGAGG GTCGGCGAGA GGTATAA 

 

Protein sequence

MQYSRSVGRL IEELARLPGI GPKTAQRLAF HLVTAPREAA ESLSRAILEA RDKLVFCRVC 
ANIADENPCG ICRDQNRDHG LICVVERPRD VLAVEKAHGY RGLYHVLNGS LSPLQGVGPE 
ELNIAALVTR VREGTVREVI VATNATVEGE ATALYLARLL RPLNVRVTRL AFGLPVGSDL 
EYADGRTLAR AIEGRREV