| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0026 |
|---|
| Symbol | |
|---|
| ID | 6027006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 31450 |
|---|
| End bp | 32919 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641592879 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716227 |
|---|
| Protein GI | 169830245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTACGGGG ACGAGAGACT GAACCCCCAC CATGTCCTGC GGTACGCATT GACCAAGGAG
TTCGTGGAAA CCTTTTCTTT TCTAAAATCC TCCGGGATAG AACTCCCACT GACGCTGGTG
AGAGACTATC ACATGCATAT CAGGAGTTTC GTGGATCAAA ACCTTAGTAA TTGGAATCTG
ATCCGGCAGC TCCAGAAGAG ACACGGTTTA TACACCATCG GGGATGTACA GAGAGTACTG
GAAAGAAGGC CTCCGGTGAT TGAGGACCTT TCCCAGGACA GCGCAAGGGA TATACTGGTC
GCGCAGGTGC AGTACATACC CTTTACTTTA GACCGTTTTC CCCGTTCCAA GGTGCTGACT
ATTGCATATT CCACCCGGGA TGAGCAAATG GCCGACCGCC ATCTCTCAGA GTTTTACCGG
GTTTTCAGGG TTAGAAGAGA GATTGAAAAC GCGCAGCCGG ACCGGTTGAA GGTGGCGGCG
TTACTTAAAA AACTAGACCC GGTACTGTTC CGCCTGCAGC ATCACCCGGT TTTCAGCACA
ACGGAATTCC GGTTGTGGTT CCGCCGGTTG CTGATCTCTT CCGTGAAACT GGTTCACGTC
CTTGACCGGA TGATTCTGGA CTACCCCGTT AGGGTGATCC TCTGCAACGT GGAGGCGGTA
AACCCGGGAA CCACTCTCTC CCTGCTGGCG GCACTGTACA ACCTCGATTT CATTAACGCT
CCCACTCACG TCATCACGAA TCGCAACCTG ATTCCCACCA GGGCCACATA CCACTGTGCC
TGGGGGGAAT ACTACCGGGA CTGGCTGGAA AAACGCGGGA TTGACCCTGC CCGCATCATT
TGTACCGGGA ACCTGCGTTT CGAGTATGAA TTCCACCCCG CCAGCCTGGA CAGGAATACT
TTGGCGTCTC AGCTTGATTA TCCCGCAGAA AATTTCGTGG TTCTATTTAC TTCCCAGCCC
TTTTCCCGGG AGGTTAACGA AGAGCTGGCC CGATGGATTG AACAGGCGGT AATCGGTAAC
CCGGTGACGG TGCTGATCAA ACCCCACCCC AGCGACACTA CAAATTACGC CCCTTTTACC
AGGACAGGGA GCATTATGGT AGTGCCGGAA TGGGCTAAGC TACCGGACCT GTTGCCGAAC
ATAGATTTTT TAATGACCAT ATCCTCCAGC ACCGCTATTG AAGGAGCGTT GAGGGGGAAA
GGGCTGATCG TCCTGCAACC TGCACTCCCA TACCATTATG AAACAAACAA CAATGACATT
AACGCCTTCC TGGTCCGTTC CAGAGCGGGT TTTGTGGCTT CTTCACCGCA GCAGTTAGCA
AGAATAATCT CCAGGCTGTG TCACAGTGAA CGCTGGCGCA AAAGGCTGCA TATGATGACA
CAAGCTTTTC TCGAGAAAAC CATTCATAAA GGAGTCTACT CAAATCCGTC AGGCGACATA
TACCAACTCA TAAAGAACTT GCTTGGGTAA
|
|---|
| Protein sequence | MYGDERLNPH HVLRYALTKE FVETFSFLKS SGIELPLTLV RDYHMHIRSF VDQNLSNWNL
IRQLQKRHGL YTIGDVQRVL ERRPPVIEDL SQDSARDILV AQVQYIPFTL DRFPRSKVLT
IAYSTRDEQM ADRHLSEFYR VFRVRREIEN AQPDRLKVAA LLKKLDPVLF RLQHHPVFST
TEFRLWFRRL LISSVKLVHV LDRMILDYPV RVILCNVEAV NPGTTLSLLA ALYNLDFINA
PTHVITNRNL IPTRATYHCA WGEYYRDWLE KRGIDPARII CTGNLRFEYE FHPASLDRNT
LASQLDYPAE NFVVLFTSQP FSREVNEELA RWIEQAVIGN PVTVLIKPHP SDTTNYAPFT
RTGSIMVVPE WAKLPDLLPN IDFLMTISSS TAIEGALRGK GLIVLQPALP YHYETNNNDI
NAFLVRSRAG FVASSPQQLA RIISRLCHSE RWRKRLHMMT QAFLEKTIHK GVYSNPSGDI
YQLIKNLLG
|
|---|
| |