| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0006 |
|---|
| Symbol | |
|---|
| ID | 6027478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 6092 |
|---|
| End bp | 6688 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641592854 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_001716207 |
|---|
| Protein GI | 169830225 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.292815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACATCTA GCCGGGAAAG CGGGAGGGAC GGCGCCGGCC TCGCCGTGTT TACTGCCGGG
GACCGGGAGA CACTCAAGCA GTTGCTCCTG ACCCGGTCTT TCCAGTTCGG GGAATTCACC
CTTTCCTCCG GGAAGAAAAG TAACTACTAC TTCGACGGCA AGCAGGTCAC GCTCCACCCC
CGGGGGGCCT TGCTCACGGC CAGGGCGGTC CTGGAAAAGG TGCGGGGCAC CGGCGTGCAG
GCGGTGGGCG GTCCGACTAT CGGGGCGGAC CCGATGGTGG GGGCGTTGGG CGTGGTCTGT
GCGCTCGAGG GAATCGATCT CGGGCTTTTC ATCGTCCGGA AGGATCAGAA ACAGCACGGC
AAGCGGCTGC GCATTGAAGG CCGGAAGATT GCTCCCGGAG AGAGGGTGGC CGTGATCGAT
GACGTCCTCA CCACCGGCGG TTCGATTCTG ACCGCCGTCG AAGCCGTCCG GGAGGCCGGC
GGGGAGGTGG TGCTGGCCGT GGTCCTGGTA GACCGCTGCG AAGGCGGGAC CGAACTCCTG
GAGAGCAAAG GTATTTCGGT CGATCCCATG TTTACGGTCA AAGATTTCGG TCTCTAA
|
|---|
| Protein sequence | MTSSRESGRD GAGLAVFTAG DRETLKQLLL TRSFQFGEFT LSSGKKSNYY FDGKQVTLHP
RGALLTARAV LEKVRGTGVQ AVGGPTIGAD PMVGALGVVC ALEGIDLGLF IVRKDQKQHG
KRLRIEGRKI APGERVAVID DVLTTGGSIL TAVEAVREAG GEVVLAVVLV DRCEGGTELL
ESKGISVDPM FTVKDFGL
|
|---|
| |