Gene Caul_5058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5058 
Symbol 
ID5902520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5457216 
End bp5458202 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content67% 
IMG OID641565579 
Productglyoxylate reductase 
Protein accessionYP_001686676 
Protein GI167649013 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.378671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCC GCAAGCTCAA AGTCATCGTC ACCCGCAAAC TGCCCGATCC GGTGGAGACG 
CGGATGTGCG AGCTGTTCGA TACGCAACTC AACGTCACCG ACAAACCCTT GACGGCCGAT
GAACTGGTCG AGGCGATGAA CGAGGCCGAC GTTCTGGTGC CCACCATCAC CGATCGCATC
GATTCGCGCC TGCTGTCGCG GGCCGGCGAC CGGCTGAAGC TGATCGCCAA TTTCGGGGCG
GGGGTGGACA ATATCGACGT CGCCACCGCC AACGCCCGGG GCATCATCGT CACCAACACC
CCCGGGGTGC TGACCGAGGA CACGGCCGAC CTGACCATGA CCCTGATCAT GGCCGCCTCG
CGCCGGGTGG TCGAGGGGGC CGAGGTGGTC AAGGCCGGCG GCTTCCACGG CTGGTCGCCG
ACCTGGATGC TGGGCCGCCG CCTGTGGGGC AAGCGCCTGG GCATCATCGG CATGGGCCGC
ATCGGCCAAG CCGTGGCCCG CCGCGCCAAG GCCTTCGGCA TGCAGGTGCA CTACCACAAC
CGCAAGCCCG TCAGCCCGCG CATCGCCGAG GAGCTGGGCT GCACCTACTG GGAGAGCCTG
GACCAGATGC TGGCCCGGAT GGACATCATC TCGGTCAACT GCCCGCATAC CCCGGCCACC
TACCACCTGC TGTCGGCCCG CCGGCTGAAG CTGCTGCGGC CGCAGACCAT CATCGTCAAC
ACCGCGCGCG GCGAGGTGAT CGACGAGGGC GCCCTGGCCA ACATGCTGGC GCGCGGCGAG
ATCGCGGGCG CGGGCCTCGA CGTCTACGAG CACGAGCCGG CCATCAATCC CAAGCTGCTG
AAGCTGCCCA ATGTCGTGCT GCTGCCCCAC ATGGGCTCGG CCACGGTCGA GGGCCGCATC
GACATGGGCG AGAAGGTCAT CGTCAACGTG AAGACCTTCA TGGACGGGCA CCGGCCGCCG
GACCGGGTGA TCCCGTCGAT GCTCTAA
 
Protein sequence
MSARKLKVIV TRKLPDPVET RMCELFDTQL NVTDKPLTAD ELVEAMNEAD VLVPTITDRI 
DSRLLSRAGD RLKLIANFGA GVDNIDVATA NARGIIVTNT PGVLTEDTAD LTMTLIMAAS
RRVVEGAEVV KAGGFHGWSP TWMLGRRLWG KRLGIIGMGR IGQAVARRAK AFGMQVHYHN
RKPVSPRIAE ELGCTYWESL DQMLARMDII SVNCPHTPAT YHLLSARRLK LLRPQTIIVN
TARGEVIDEG ALANMLARGE IAGAGLDVYE HEPAINPKLL KLPNVVLLPH MGSATVEGRI
DMGEKVIVNV KTFMDGHRPP DRVIPSML