| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5056 |
|---|
| Symbol | |
|---|
| ID | 5902518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 5455205 |
|---|
| End bp | 5456719 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641565577 |
|---|
| Product | succinate CoA transferase |
|---|
| Protein accession | YP_001686674 |
|---|
| Protein GI | 167649011 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.265353 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA CGCGGATTGG TCACCCTGGC CTGCGCGCCA AGGTCATGGG AGCCGACGAC
GCGGCGGCCT TGATCGCGCC GGGCAGCACG GTCGGCATGA GCGGCTTTAC CGGTTCGGGC
TATCCGAAGG CCGTGCCCGT CGCCCTGGCC TCGCGGATCG AGGCGTCCCA CGCCGCGGGT
GATCCTTTCC GGCTTCGGGT GTGGACCGGC GCTTCTACCG GGCCGGAACT GGACGGCGCC
CTGGCGCGCA GCAACGGCAT CGAGTTCCGG CTGCCCTACA ATTCCGACCC GATCGCCCGC
GAGAAGATCA ATCGCGGCGA GATGGAATAT TTCGACATGC ACCTGTCCCA GGTGGCGCCC
ATGGCCTGGC AGGGGTTCCT GGGACCGTTG GACACCGCGG TGGTCGAGGT CTCCGGGATC
CGCGCCGACG GTTCGCTGAT CCCCTCCTCG TCGGTGGGCA ACAACAAGAC CTGGCTGGAC
CGGGCCGACA AGATCATCCT CGAGGTCAAT CGCTGGCAGA ACCCGGCGCT GGAGGGCATG
CACGACATCT ATTACGGCAC GGCCCTGCCG CCCAACCGCG TGCCGATCCC GCTGGTTCGC
CCGGATGATC GCATCGGCGA GGCCTATTTC CGGGTCGATC CGGCCAAGAT CGTCGCCATC
GTCGAGACCG AGGCGCCCGA CCGCAACCTG CCGTTCGCGG CCCCGGACGG CGCGGCCCTG
GCGATCGCCG GGCACCTGCT GGAGTTCTTC GCCCACGAGG TGAAGAAGGG CCGGTTGCCG
GCCTCGCTGC TGCCGCTGCA GTCGGGCGTG GGCAACATCG CCAACGCCGT GCTGACCGGC
CTGGTCGACG GACCGTTCGA CAATATGACG TCCTATACCG AGGTCATCCA GGACGGCATG
CTTGACCTGC TGGACAGCGG CAAGCTGCGC ATGGCCTCGG CCACAGCCTT CTCGCTCAGT
CCCGAGGCCG CCGCGCGGAT CAACGCCGAC ATGGGCCGCT ATCGCGACAA GATGATCCTG
CGGCCCCAGG AGATCAGCAA CCACCCTGAA GTGATCCGCC GCCTCGGCTG CCTGGCCATG
AACGGCCTGA TCGAGGCCGA CATCTACGGC AACGTCAACT CCACCCACGT CATGGGTTCG
CGCATCCAGA ACGGCATCGG CGGCTCGGGC GACTTCGCCC GCAACGCCTA TGTGTCGATC
TTCATGACAC CGTCGACCGC CAAGGGCGGC AAGATCTCGG CGATCGTGCC CCAGGCCAGC
CACGTCGACC ATATCAACCA GGACGTCCAG GTGCTGGTCA CTGAACAGGG CCTGGCCGAC
CTGCGCGGCC TTTCGCCCAA GCAGCGGGCC CGGGTGATCA TCGACAATTG CGCCCACCCT
GATTTCCGTC CGGGCCTGGA GGACTATTTC ACGCGGGCCA AGGCCGGCGC CTATGGTCAG
CAGACCCCGT GCCTGCCGAG CGAGGCGCTG TCCTGGCACC AGCGGTTCAT GGAGACGGGG
TCGATGCGGA CCTGA
|
|---|
| Protein sequence | MNDTRIGHPG LRAKVMGADD AAALIAPGST VGMSGFTGSG YPKAVPVALA SRIEASHAAG
DPFRLRVWTG ASTGPELDGA LARSNGIEFR LPYNSDPIAR EKINRGEMEY FDMHLSQVAP
MAWQGFLGPL DTAVVEVSGI RADGSLIPSS SVGNNKTWLD RADKIILEVN RWQNPALEGM
HDIYYGTALP PNRVPIPLVR PDDRIGEAYF RVDPAKIVAI VETEAPDRNL PFAAPDGAAL
AIAGHLLEFF AHEVKKGRLP ASLLPLQSGV GNIANAVLTG LVDGPFDNMT SYTEVIQDGM
LDLLDSGKLR MASATAFSLS PEAAARINAD MGRYRDKMIL RPQEISNHPE VIRRLGCLAM
NGLIEADIYG NVNSTHVMGS RIQNGIGGSG DFARNAYVSI FMTPSTAKGG KISAIVPQAS
HVDHINQDVQ VLVTEQGLAD LRGLSPKQRA RVIIDNCAHP DFRPGLEDYF TRAKAGAYGQ
QTPCLPSEAL SWHQRFMETG SMRT
|
|---|
| |