Gene Caul_5048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5048 
Symbol 
ID5902510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5448116 
End bp5448826 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID641565569 
Productendonuclease III 
Protein accessionYP_001686666 
Protein GI167649003 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.232344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAC CCGCTCGCAA GCCCTCCAGA CCTCTCGTCA AGAAACGCCC CGCGGCCAAG 
CGCGTCTCGC CGGCCGAGCG CGAGCGGATC GAGGTGCTGT TCTCGCGGTT CGAAAGCCTG
GAAGATCATC CCAAGACCGA GCTGCGCTAT TCCAACCCCT ACACCCTGGT GACCGCCGTC
GCCCTGTCGG CCCAGGCCAC CGACGTCCAG GTCAACAAAG CCACGGGACC GCTGTTCCAG
GTTGCCGACA GCGCCGCCAA GATGCTGGAG CTGGGCGAGG CGGGCCTGAT CCCCTACATC
GCCTCGATCG GCCTGTTTCG CACCAAGGCC AAGAACGTGA TCGCCGCCGC CCGTATCCTG
GTCGATCGCC ACGGCGGCGA GGTGCCGTTG AACCGAGAGG CGCTGGAAAG CCTGCCTGGC
GTGGGCCGCA AGACCGCCAG CGTGGTGCTG AACGAACTGG ACATCGAACC GGCCATCGCC
GTCGACACCC ATGTGTTCCG CGTCTCGCAC CGGCTCAAGT TGTCGGCCGG CAAGACGCCG
GACGCGGTCG AGGCCGACCT GATGCGGGTG GTTCCGGACC GCTACAAGAC CCGGGCGCAC
CACTGGCTGA TCCTGCATGG ACGCTATGTG TGCGTGGCGC GGAAGCCGAA GTGCGAGCTG
TGCCGGATCT CGGATCTTTG TCCGTCTCGG GAATTGTTTC TCGGCGCTTG A
 
Protein sequence
MAPPARKPSR PLVKKRPAAK RVSPAERERI EVLFSRFESL EDHPKTELRY SNPYTLVTAV 
ALSAQATDVQ VNKATGPLFQ VADSAAKMLE LGEAGLIPYI ASIGLFRTKA KNVIAAARIL
VDRHGGEVPL NREALESLPG VGRKTASVVL NELDIEPAIA VDTHVFRVSH RLKLSAGKTP
DAVEADLMRV VPDRYKTRAH HWLILHGRYV CVARKPKCEL CRISDLCPSR ELFLGA