Gene Caul_5043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5043 
Symbol 
ID5902505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5444174 
End bp5444899 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content70% 
IMG OID641565564 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_001686661 
Protein GI167648998 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.226642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCT ATCCCGCCAT CGACCTGAAG GACGGCCAGT GCGTGCGCCT GCTGCACGGC 
GACATGGAAA AGGCCACGGT CTTCAACAAC AGTCCGGCCG ACCAGGCCGA GCGCTTCGTG
CGCGACGGCT TCTCCTGGCT GCACGTGGTC GACCTGAACG GCGCGATCGA GGGCAAGTCG
GTCAACACCG CCGCCGTGCA GTCGATCCTG GAGTCGATCT CGATCCCCGT GCAGCTGGGC
GGCGGCATCC GGACCCTGGA GGGCGTCGAG GCCTGGATCG AGGCGGGCGT GTCGCGCGTG
ATCCTCGGCA CCGTGGCCGT CCACGACCCA GACCTGGTCC GCAAGGCCGC TCGCCTTTGG
CCCGAACAGA TCGCCGTGGC CGTCGACGTG CGCGACGGCA AGGTGGCGGT CGACGGCTGG
ACCGGCCTGT CGGACCTGGA CGCCATCACC CTGGGCAAGC GCTTCGAGGA CGTGGGCGTG
GCCGCGCTGA TCGTCACCGA TATCAGCCGC GACGGCGCCC TGACCGGGGT CAATGTCGAA
GGCGTGGGCG AGCTGGCCGA CGCGGTCTCG ATTCCGGTCA TCGCCTCGGG CGGCGTGGCC
TCGGTGGCCG ACATCGAGCG GCTGAAGGCC CGGCCCGGCG TCGAGATCGC CGGCGCCATC
CTGGGCCGAT CGCTCTATGC CGGCACGATT CGTCCGGCCG AAGCCCTGAC CATAGCGGCC
GCCTGA
 
Protein sequence
MILYPAIDLK DGQCVRLLHG DMEKATVFNN SPADQAERFV RDGFSWLHVV DLNGAIEGKS 
VNTAAVQSIL ESISIPVQLG GGIRTLEGVE AWIEAGVSRV ILGTVAVHDP DLVRKAARLW
PEQIAVAVDV RDGKVAVDGW TGLSDLDAIT LGKRFEDVGV AALIVTDISR DGALTGVNVE
GVGELADAVS IPVIASGGVA SVADIERLKA RPGVEIAGAI LGRSLYAGTI RPAEALTIAA
A