Gene Caul_5037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5037 
Symbol 
ID5902499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5440063 
End bp5440557 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content71% 
IMG OID641565558 
Productprotein-export protein SecB 
Protein accessionYP_001686655 
Protein GI167648992 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.353724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGACCGCCGC TCCGCCCGCC GCTCCCGAAG ACGGCGCGCC CGGCGAAACC 
GGCATCCGCA TCATCGCCCA GTTCGTCCGC GATTTCTCGT TCGAGAGCCC GCACGCCCCC
GACTCGCTGC GCGCCGGCGG CGCCCCGCCG GCCATCGACA TGGGCGTCGA GATGAACGCC
CGCGGCCGTC CCGACGGCCT GTTCGAGGTG GATCTGAAGC TGTCGGCGCG CGCCACCCGC
GACGAGCAGC CGGTGTTCCA CGTCGAGGTC CTGTACGGCG GCCTGTTCCA CATCGCCGGC
GTGCCGGAAG GCGATCTAGA GCCGGTGCTG CTGATCGAGT GCCCGCGCTT CCTGTTCCCC
TACGCCCGCC GCCTGATCTC GGACGTCACC ACCGAAGGCG GTTTCCCGCC CTTCCTGATC
GACCCGATCG ATTTCGCCGG CGTCTACGCG GCCCGCAAGG CCCAGGCCGA AGGCGTGGTG
GTCGGCAACG CCTGA
 
Protein sequence
MTDTTAAPPA APEDGAPGET GIRIIAQFVR DFSFESPHAP DSLRAGGAPP AIDMGVEMNA 
RGRPDGLFEV DLKLSARATR DEQPVFHVEV LYGGLFHIAG VPEGDLEPVL LIECPRFLFP
YARRLISDVT TEGGFPPFLI DPIDFAGVYA ARKAQAEGVV VGNA