Gene Caul_5021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5021 
Symbol 
ID5902483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5424430 
End bp5425137 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID641565542 
Productcarboxymethylenebutenolidase 
Protein accessionYP_001686639 
Protein GI167648976 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0018188 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA CCCTTACGAT CACAACGCCT GACGGCGCCT TTTCAGCCTA TGTGGCGCGG 
CCCCCAGCGG CTCTGGCGGC AACACCCGCG CCCGCCATCG TGGTCATTCA GGAAATCTTT
GGCGTCAACA AGGTGATGCG CGACGTCTGC GACGACCTCG CCGCCCAAGG CTTCGTCGCC
GTGTGTCCTG ATCTGTTCTG GCGGATCGAG CCGGGAATCG ACATCACCGA CCAGAGCGAA
GCGGAATGGA AGAAGGCCTT CGAACTCTAT AACGCCTTCG ACGTCGACGC CGGCGTTTCG
GACATCGCCG CCACGATTGC CGCCGTCCGC GCCCTGCCCG GCGTCAACGG CAAGGTCGGC
GCGGTCGGCT ACTGCCTGGG CGGCCTGCTC GCCTTCCTGA CCGCGGCCCG AACCGACAGC
GATGCGACCG TCGCCTATTA CGGCGTCGGC ATCGAGAAAC ATGTGGGAGA AGCCGACAAG
CTGGCCCGGC CGCTGTTGAT GCACATCGCC GAGGAGGACC AGTTCGTGCC CAAGGAAGCC
CAGAAGGTGA TCCTGGGCGC GTTGAAGGAT CACTTGCAGA TCGAGGTCCA TACCTACCCT
GGCCGCGATC ACGCCTTCGC CCGGGTCGGC GGCGAGCACT ACGACGCGGC CGACGCCGGT
ACGGCCAATG CGCGCAGCCT GGCCTTCTTC AAGTCCAACC TGGGCTGA
 
Protein sequence
MSETLTITTP DGAFSAYVAR PPAALAATPA PAIVVIQEIF GVNKVMRDVC DDLAAQGFVA 
VCPDLFWRIE PGIDITDQSE AEWKKAFELY NAFDVDAGVS DIAATIAAVR ALPGVNGKVG
AVGYCLGGLL AFLTAARTDS DATVAYYGVG IEKHVGEADK LARPLLMHIA EEDQFVPKEA
QKVILGALKD HLQIEVHTYP GRDHAFARVG GEHYDAADAG TANARSLAFF KSNLG