Gene Caul_5008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5008 
Symbol 
ID5902470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5411142 
End bp5411780 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID641565529 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_001686626 
Protein GI167648963 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CGACCCGCCG CTTGATCATC GCCGCAGGCC TGAGCCTGGC CGTCGCCGGC 
CCCGCCCTCG CCGCCCAGCC GCCGGCCGCC AGGCTGTCGG CCGACGAGCA GGCTCTGGTC
GACAGGGCCA CGGCCTATAT CCAGACGCTC GGTTCGGCCA AGGGCCGCTT CGTCCAGACC
GACGCCCGCG GAAGCCAGAC CCAGGGGCTC TTCTACCTGC AGCGTCCGGG CAAGGCCCGC
TTCGCCTATG ACGGCCCGGC CGGCCTGCTG GTCGTCAGCA ACGGCGCCAA CGTCAACATC
TACGACAGCC GGCTGAAGAC CTTCGAGAGC TACCCGCTGA ACCGCACGCC CCTGGCCCTG
CTGCTGGCCC GCGAGGTGCG GCTGGATCGC GGCGTGACCA TCACCGGCGT GCGCAAGCTG
AGCGACGGCT TCACGATCAC CGCCGTTGAC GCCAAGCGCC AGACCCTGGG CCGCATCGCC
CTGGACTTCA GCAACGCCCC CGCCCTGACC GGCTGGACGG TGACCGACGT GAAGGGCGGC
GAGACCCGCG TGCGGCTGGC GGACTTCGAA AAGACCTCGG GACTGGACCC GAAACTTTTC
GTCCTTTCCG ATCCAAGGCG CCGGGTCGGC AAGCCGTAG
 
Protein sequence
MTTTTRRLII AAGLSLAVAG PALAAQPPAA RLSADEQALV DRATAYIQTL GSAKGRFVQT 
DARGSQTQGL FYLQRPGKAR FAYDGPAGLL VVSNGANVNI YDSRLKTFES YPLNRTPLAL
LLAREVRLDR GVTITGVRKL SDGFTITAVD AKRQTLGRIA LDFSNAPALT GWTVTDVKGG
ETRVRLADFE KTSGLDPKLF VLSDPRRRVG KP