Gene Caul_4988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4988 
Symbol 
ID5902450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5389665 
End bp5390330 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content75% 
IMG OID641565509 
Productheme exporter protein CcmB 
Protein accessionYP_001686606 
Protein GI167648943 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01190] heme exporter protein CcmB 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGT TCCTGATCCT GCTCCGCCGC GAGCTGGCCC TGGCCTGGGG CGCCGGCGGC 
GGACCGCTGC TGGCCCTGGC CTTCTACGCC TGCGTCGTCA CCCTGCTGCC GCTGGCGGCG
GGCCGCGCGC CCGAGCGGTT GGCGAGCTTC GCCCCCGGCA TCGCCTGGCT GGCCCTGGCC
CTGGCCGCCT TGCTGTCGCT GGAGCGTCTG TTCGAGCGCG ATTTCGAGGA CGGGGCGCTG
GACCTTCTGG CCCTGGGTCC TGCCCCCCTC GAGGCGGTGG CCGTTGCGAA ATGCCTGGCC
CACTGGCTGG CGGCCGGCGC GCCCCTGGCC TTCGCCGCCC CGATCGCCGC CCTGGCCCTG
GGGGCGGAGC CCTCGATCAT TCCGCTGCTG ATCCCCTGCG CCCTGGCCGG CGGACTGGCC
TTCTCGTTCC TGGGCGGACT GGGCGCGAGC CTGGCGCTGG GGTCGAAGCG CGGCGGCCTG
CTGGTGGCGG TGATCGTCCT GCCGCTCTAC GTGCCGCCGG TGATCTTCGG GGCCGGCGCG
TTGGACGCCC TGGCCGGCGG CTTGCCGTGG ACGGGGGGGT TGTTCCTGCT GCTGGCCTAT
TCGGCGGCGG CCGTGGCTCT AGGTCCGATC GCCATGGCGG CGGCCTGCCG GAACGCGCTG
GATTAG
 
Protein sequence
MRAFLILLRR ELALAWGAGG GPLLALAFYA CVVTLLPLAA GRAPERLASF APGIAWLALA 
LAALLSLERL FERDFEDGAL DLLALGPAPL EAVAVAKCLA HWLAAGAPLA FAAPIAALAL
GAEPSIIPLL IPCALAGGLA FSFLGGLGAS LALGSKRGGL LVAVIVLPLY VPPVIFGAGA
LDALAGGLPW TGGLFLLLAY SAAAVALGPI AMAAACRNAL D