Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4958 |
Symbol | |
ID | 5902420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 5360746 |
End bp | 5362254 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641565479 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001686576 |
Protein GI | 167648913 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTCTCG GCCACAGATT GGAGCTTCGG CAAGGCCAAG GCCTTGTCAT CACGCCGCAG CTTCAGCAGG CGATCAAGCT GCTGCAGCTG TCGAACCTCG AGCTCGACGC CTTCGTCGAG GCCGAGCTCG AGCGCAACCC CCTGCTCCAG CGCGAAGACG GTCCGGTCGA GGCCGAACGC GCGCCTGAAG ACGTCGAGCG CGCGCCCGAG AACCTCGGCC TGGACTCGGT GTCCGACAGC GCCGCCAGCG TCCAGATGGA CGCCACGCCC GACGACGTCT CGCCCGGCGA GCGCGCCACC GGCGACGGCC CGGACTCTGA AGGTGGAGCC GAGCAGGCCG GCGGCCAGAT CGACTGGTCG CGAACCGGCG GCGGCGGCAA TTTCGAGAGC GACGACAATT ACGAAAGCGC CCTGTCGCGC GCCCCAACCC TTTGCGAGCA CCTGACCGAG CAGTTGGCCG TGGCCGGCCT GACCGCCGCC CAGAACGTGG TGGCCGGGGT GCTGATCGAC GCGGTCGATG AGACCGGCTA CCTGCGCGCC GACCTGCTCG AAGTGGCCGA GCGCCTGGGC TGCGGCCTGG ATTTCGTGGA AGGCGTGCTG ACCGTCCTGC AAGGCTTCGA GCCCGCCGGC GTCATGGCCC GCGACGTGCG CGAGTGCCTG GCCCTGCAGC TGAAGGACGT CAATCGCTAC GACCCGTGCA TGGCCGCCCT GCTCGACAAT CTCGACCTGC TGGCCAAGCG CGACATGGCG TCCCTGCGCA AGGTCTGCGG CGTGGACGAC GAGGACCTGC GCGAGATGGT CGCGGAGATC CGCGCCCTGA CCCCTCGCCC CGGCGCGGCC TTCCACGCGG ACCCGCCCCA GACCCTGGTG CCCGACGTCC ATGTCCGCGA GACGCCCGGC GGCCTGTGGC ACGTCGAGCT GAACACCGAC ACCCTGCCCC GGGTTCTGGT CGACCAGCGC TACCACGCCC GGGTCAGCAA GGGCGCGCGC ACCGACCAGG AAAAGACCTT CGTCTCCGAC AGCTTCGCCA CCGCCAACTG GCTGGTCAAG AGTCTCGACC AGCGGGCCAA GACCATCCTG AAGGTGTCCA GCGAGATCGT CCGCCAGCAG GACGGCTTCC TGGCCTATGG CGTCGAACAT CTGCGCCCGC TGAACCTTAA GACCGTCGCC GACGCCATCG GCATGCACGA GAGCACCGTC AGCCGGGTGA CCTCCAACAA GTACATCGCC ACCCCGCGCG GGGTGTTCGA ACTGAAATAT TTCTTCACCT CGGCCATCCA GTCCAGCGAG GGCGGCGAGG CCCATTCGGC CGCCAGCGTG CGCTACAAGA TCAAGGGCCT GGTCGAGGCC GAGCGCACCG AGGCCGACGT CCATTCCGAT GACCGCATCG TCGAGATCCT CAAGGACGCC GGCGTCGACA TCGCCCGCCG GACGGTGGCC AAGTATCGAG AAGCCCTGCG TATTCCGTCC TCCGTCGAGC GTCGCCGCTT GATCAAGGAA ACCGCCTGA
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Protein sequence | MALGHRLELR QGQGLVITPQ LQQAIKLLQL SNLELDAFVE AELERNPLLQ REDGPVEAER APEDVERAPE NLGLDSVSDS AASVQMDATP DDVSPGERAT GDGPDSEGGA EQAGGQIDWS RTGGGGNFES DDNYESALSR APTLCEHLTE QLAVAGLTAA QNVVAGVLID AVDETGYLRA DLLEVAERLG CGLDFVEGVL TVLQGFEPAG VMARDVRECL ALQLKDVNRY DPCMAALLDN LDLLAKRDMA SLRKVCGVDD EDLREMVAEI RALTPRPGAA FHADPPQTLV PDVHVRETPG GLWHVELNTD TLPRVLVDQR YHARVSKGAR TDQEKTFVSD SFATANWLVK SLDQRAKTIL KVSSEIVRQQ DGFLAYGVEH LRPLNLKTVA DAIGMHESTV SRVTSNKYIA TPRGVFELKY FFTSAIQSSE GGEAHSAASV RYKIKGLVEA ERTEADVHSD DRIVEILKDA GVDIARRTVA KYREALRIPS SVERRRLIKE TA
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