Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4954 |
Symbol | |
ID | 5902564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 5357808 |
End bp | 5358425 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641565475 |
Product | 3'-5' exonuclease |
Protein accession | YP_001686572 |
Protein GI | 167648909 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.332898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCAACT TCCTGCATGA AGGCGACCTG CCCGACGGCG TTTTCGCCGG CGCCGCCGCC ATCGCCATCG ATTCCGAGAC CATGGGCCTG CGCCTGGGCC GCGACCCGCT GTGCGTCGTC CAGCTGTCGT CCGGCGACGG CGACGCCCAT GTGGTGCGCC TGGACCGCGC GACCTACGAC GCCCCCAACC TCAAGCGCCT GCTGACCGAT CCGTCGGTGG TCAAGCTGTT CCACTTCGGC CGCTTCGATA TCGCCATGTT CCTGTTGCAC CTGGGTGTCA TGACAGCGCC TGTGTACTGC ACCAAGATCG CCTCCAAGCT GGCCCGCACC TATACCGATC GCCACGGCCT GAAGGACGTG ACGCGCGAAC TGGTCGGCGT CGAGCTGTCG AAGGTCCAGC AGAGTTCGGA CTGGGGCGCG GCGACCCTGT CGCCGGAGCA ACTGGCCTAT GCCGCCTCCG ACGTGCTGCA CCTGCACGCC CTGCGCGAGC GCCTGAACGC CATGCTGGTC CGCGAAGGCC GCATGCAATT GGCCCAGGCC GCGTTCGACT ATCTTCCCCA CCGCGCCGCC CTCGACCTGG CCGGCTGGGA AGACGTCGAC ATCTTCGCCC ACACCTGA
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Protein sequence | MANFLHEGDL PDGVFAGAAA IAIDSETMGL RLGRDPLCVV QLSSGDGDAH VVRLDRATYD APNLKRLLTD PSVVKLFHFG RFDIAMFLLH LGVMTAPVYC TKIASKLART YTDRHGLKDV TRELVGVELS KVQQSSDWGA ATLSPEQLAY AASDVLHLHA LRERLNAMLV REGRMQLAQA AFDYLPHRAA LDLAGWEDVD IFAHT
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