Gene Caul_4939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4939 
Symbol 
ID5902401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5336341 
End bp5337615 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content70% 
IMG OID641565459 
Productacetylornithine deacetylase 
Protein accessionYP_001686557 
Protein GI167648894 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.965215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCCT CCGAAATCTC CTCCTCCGAA GCCCTGGCCA GCCGGGCGAT CGACATTCTG 
TCGACCCTGG TGGCCTTCGA CACCACCTCC CGGTTCTCCA ACCTGGCCCT GATCGAATGG
GTCGAGGCCT ATCTGTCGGA TCTCGGCGTC GCCTCGCGGC GGGTGCCCAA CGCCGACGGG
ACCAAGAGCA ACCTGCTGGC CAGCATCGGC CCGGCGATCC CCGGCGGCGT CGTGCTGTCG
GGCCATACCG ACGTGGTGCC GGTCGACGGC CAGTCCTGGA GCAGCGACCC GTTTGTCCTG
ACCCCGCGCG ACGGCCGGCT CTACGGCCGC GGAACCTGCG ACATGAAGGG CTTTCTCGCC
CTGGCCCTGG CCGCCGCGCC GGACCTGGCG CGCTCCACCC TGGACCGTCC CGTCCACCTG
GCCTTCTCCT ATGACGAGGA GGTCGGCTGC CTGGGCGCGC CCGACATGAT CGCGGTGATC
GCCGACGAGC TGCCCCGCCC GGCCCTGGTG GTGGTCGGCG AGCCCACCGA CATGGTCGCC
GTGCGCGGCC ACAAGGGCAT CGCCAGCTTC CGCGTCACGG TCACCGGCCG CGAGGCCCAT
TCCAGCCTGA CCCACCTTGG CGTCTCGGCC AACATGGTCG CCATCAAGCT GATGAGCCAT
CTGGTGGAAC TGTCCGAACG GCTGGAGCGC GAGGCCGACC CGGACTCGCC GTTCATGCCC
AAGGGCGCGA CCCTGACCGT CGGCCAGGTC AACGGCGGCA CGGCGGTCAA TATCCTGGCG
CGGGAGTGTG TGTTCATCTT TGATCTGCGC GTCCCGACCG GGCTGGACCC AAAGGCGATC
CTGGCCGACT TCTTCGCCCT GGCCGCCGCG CTGGACGCCG AGGTCAAGGC CAAGGCCCCC
GAAGGCGGCG TGGTGGTCGA GACCCGCTCG ATGACCCCGG CCTTCGCGCC GGAGGTCGAC
GGTGCGGCCG AGACCTTCGC CCGCCGCATC GCTGGCGACA ACGGCCCGCC GCGCGTCGTG
CCCTACGCCG CCGAGGCCGG CCAGTTCCAG GGCGCGGGCT TCTCGACCGT GATCTGCGGC
CCCGGCTCGA TCGACCAGGC CCACCAGCCC GACGAATATG TCGAGATCAG CCAGATGGAA
CGCGGCGCCG CCTTCATGCG CCGGCTGATC GAGGACCTTT CCCAGGCACG ACGGCCGCAA
GCGGAAGCCG TTTCGGCGAC CGTCGCGCGT CTTCCAGGAA GCGCTACCGA TCCAGGGATT
GGTAGCGGCG AATGA
 
Protein sequence
MVSSEISSSE ALASRAIDIL STLVAFDTTS RFSNLALIEW VEAYLSDLGV ASRRVPNADG 
TKSNLLASIG PAIPGGVVLS GHTDVVPVDG QSWSSDPFVL TPRDGRLYGR GTCDMKGFLA
LALAAAPDLA RSTLDRPVHL AFSYDEEVGC LGAPDMIAVI ADELPRPALV VVGEPTDMVA
VRGHKGIASF RVTVTGREAH SSLTHLGVSA NMVAIKLMSH LVELSERLER EADPDSPFMP
KGATLTVGQV NGGTAVNILA RECVFIFDLR VPTGLDPKAI LADFFALAAA LDAEVKAKAP
EGGVVVETRS MTPAFAPEVD GAAETFARRI AGDNGPPRVV PYAAEAGQFQ GAGFSTVICG
PGSIDQAHQP DEYVEISQME RGAAFMRRLI EDLSQARRPQ AEAVSATVAR LPGSATDPGI
GSGE