Gene Caul_4931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4931 
Symbol 
ID5902393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5328893 
End bp5329543 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content59% 
IMG OID641565451 
ProductABC-2 type transporter protein 
Protein accessionYP_001686549 
Protein GI167648886 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCTC TGGTGCTTGG CCTTGGGTTG CTTTACAGCC AGATTTTCCA TCAGCCCTTC 
AAGGAGTACG TCTCGTTTAT CGCGGCGGGA TTGCTGGCTT GGCAGTTCCT ATCAGGGATG
GTGTTGGACT CGACCAACGT CGTGATGGAA GCCGAACCCC ATCTGCGCGC CCTGCCCCTG
CCCCTGCCCC TGTTCGCGGC GCGGATGGTT TTGCGCAACC TAATCATCTT CGGGCACAAC
CTCGTGGTTG TGATGTTGAT GCTGTTGTAT TTCCAACATT CGGTTTCGTT CGTCACGCTG
CTGGCCGTGC TGGGCGTGGC TCTCTACGCA ATCGCCGGCT TCGCGGTCGC CCTCATCCTT
GGGCCGTTGA GCGCTCGCTT CCGCGATATC CCGCAGGTCA TCGCCAACGT CGTGCAATTG
GCCTTCTTCC TGACGCCGAT CTTCTGGAAG GCGGGCCAAC TGCGCCCGAA CAACCCCGCG
ATCGCCTTCA ATCCCTTCTT CCACTTCGTT CAGCTCGTCC GGCAACCCTT GTTGGGGATC
GCTCCGAGCT TGACCAATTG GATGGTTGCG ATCCTGATCA CCGTGCTCCT CCTCGTGTGT
GCGTTCCTCA CTCTGGCCTA TACGCGCCGC AAAATCTTCC TGTGGCTCTG A
 
Protein sequence
MGSLVLGLGL LYSQIFHQPF KEYVSFIAAG LLAWQFLSGM VLDSTNVVME AEPHLRALPL 
PLPLFAARMV LRNLIIFGHN LVVVMLMLLY FQHSVSFVTL LAVLGVALYA IAGFAVALIL
GPLSARFRDI PQVIANVVQL AFFLTPIFWK AGQLRPNNPA IAFNPFFHFV QLVRQPLLGI
APSLTNWMVA ILITVLLLVC AFLTLAYTRR KIFLWL