Gene Caul_4904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4904 
Symbol 
ID5902366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5298184 
End bp5299359 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID641565424 
Productcystathionine gamma-lyase 
Protein accessionYP_001686522 
Protein GI167648859 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCCCCGGCAA GAACCGCCTG GCCTTCGCCA CCCGCACGAT CCACGGCGGC 
CAGTTTCCCG ACCCGACGAC GGGCGCGGTG ATGGTGCCGA TCTACGCGAC CTCGACCTAT
GTCCAGTCCA GCCCCGGCGA GCACAAGGGC TTCGAGTACA GCCGCAGCCA CAACCCCACC
CGCTTCGCCT TCGAGCGCTG CGTCGCCGAT CTCGAGAGCG GCGCGGCCGG CTTCGCCTTC
GCCTCGGGCC TGGCGGCGGC CTCGACGATC CTGGAGATCC TCGACACCGG CGCCCACGTG
ATCGCCAGCG ACGACCTCTA TGGCGGTTCG TTCCGCTTGT TCGACAAGGT GCGCAAGCGT
TCGGCCGGGC TGAAGTTCAG CTTCGTCGAC ATGGGCGACC TGGCCGCCAT CGAGGCGGCG
ATCACGCCCG AGACGAGGAT GATCTGGGTC GAGACGCCCA CCAACCCGAT GCTGCGTCTC
GCCGATCTGT CCGCCATCGC CCATCTGGCC AAGGCGCGCG GCCTGATCAC CGTCGCCGAC
AACACCTTCG CCAGTCCGTT CGTTCAGCGG CCGCTGGAGC TGGGCTTCGA CATCGTCATG
CACTCGGCCA CCAAGTACCT GAACGGCCAC TCCGACGTGG TGGCGGGCGT GGCGGTGGTC
GGCGACAACG CCGAGATCGC CGAGAAGCTG AAGTTCCTGC AGAACGCCGT GGGCGCGGTG
CTGGGGCCGT TCGACAGCTT CCTGGCGCTA CGCGGGGTCA AGACCCTGGC CCTGCGCATG
CAGCGGGCCT GCGACAGCGC CCTGGCCATC GCCAAGTGGC TGTCGACCCG CAAGGACGTC
GAGCGGGTGA TCTATCCGGG CCTGCCCAGC CATCCGCAGC ACGAACTGGC CAAGCGCCAG
ATGCTGGGCG GTTTCGGCGG GATCATCTCG GTCGAGCTGA AGGGCGACGA AAGCACGGCC
AGGCGGATGC TGGAGCGCAC GCGCCTGTTC ACCCTGGCTG AAAGCCTGGG CGGCGTGGAG
AGCCTGATCG AGCATCCCGC CATCATGACC CATGCCTCGA TCCCGGCCGA TCAGCGCGCC
GCCCTGGGCA TCTCCGACAC CCTGATCAGG CTTTCGGTGG GGATTGAGGA CTGCGAGGAC
CTGATCGCCG ACCTTTCAGA GGCTTTGGCA GTCTGA
 
Protein sequence
MTDIPGKNRL AFATRTIHGG QFPDPTTGAV MVPIYATSTY VQSSPGEHKG FEYSRSHNPT 
RFAFERCVAD LESGAAGFAF ASGLAAASTI LEILDTGAHV IASDDLYGGS FRLFDKVRKR
SAGLKFSFVD MGDLAAIEAA ITPETRMIWV ETPTNPMLRL ADLSAIAHLA KARGLITVAD
NTFASPFVQR PLELGFDIVM HSATKYLNGH SDVVAGVAVV GDNAEIAEKL KFLQNAVGAV
LGPFDSFLAL RGVKTLALRM QRACDSALAI AKWLSTRKDV ERVIYPGLPS HPQHELAKRQ
MLGGFGGIIS VELKGDESTA RRMLERTRLF TLAESLGGVE SLIEHPAIMT HASIPADQRA
ALGISDTLIR LSVGIEDCED LIADLSEALA V