| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4898 |
|---|
| Symbol | |
|---|
| ID | 5902360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 5291250 |
|---|
| End bp | 5292869 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641565418 |
|---|
| Product | ATP-dependent DNA ligase |
|---|
| Protein accession | YP_001686516 |
|---|
| Protein GI | 167648853 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1793] ATP-dependent DNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCT TCGCCCATCT TCTCGATCGA CTGTCCCTGA CGGCTTCGCG CAACGCCAAG
CTCACCCTGA TCAAGGACTT CCTGCGCGAG ACGCCCGATC CCGAGCGCGG CTGGGTGCTG
GCGGCCCTGA CCGGAGCCCT GTCGTTCAGC GCCGCCAAGC CGGCCTTCAT CCGCAAGGCC
GTCGAGGCGC GAATGGACGC CCAGCTGTTC GCCTGGTCCT ACGACTATGT CGGGGACCTG
GCCGAAACCG TCGCCCTGGT CTGGCCGGCC AAGCCCGGCG CCAATCGCGA GCCAGACCTG
TCGGAGGTGG TCGAGGCCCT GCGCACCGCG TCGCGGACCG AGGTCCAGCG GCTGATCGAG
GGCTGGCTGG ACGCCCTGGA CGCCGACGGC CGCTGGGCCT TGCTGAAGCT GATGACGGGC
GGCCTGCGGG TCGGCGTGTC GGCGCGATTG GCCAAGCAGG CCTGCGCTGA CTTCGGCGGG
GTGGAGATCG GCGCGGTCGA GGAGGTCTGG CACGCCATGA CCCCGCCCTA TGGCGACCTG
TTCGCCTGGC TGGAGGGACG CTCCGAGCAG CCCTCGCCCG ATGCGCCGGG GCGGTTCCGG
CCGGTAATGC TGGCCCAGGC GATCGACGAG GTCGTGGACT TCGCCAAGCT CGATCCCGCC
GACTACGCCG CCGAGTGGAA GTGGGACGGC ATCCGCGTCC AGGCGGTCAG CGAACGCGGC
GAGCGGCGGC TCTATACCCG CACCGGCGAC GACATTTCGG CGACCTTTCC CGACGTGCTG
GAGGCCCTGA CCTTCGAAGG CGCGCTCGAC GGCGAGCTCT TGGTGATGCG CGATGGGCGG
GTCGCGAGCT TTGGCGACCT GCAGCAGCGG CTGAACCGCA AGACGGTCGA CGCCAAGCAA
CTGGCCAATT TTCCGATCGG TATTCGCGCC TATGATCTGC TGCTCGACGG CGAGGCCGAC
CTGCGCGGCC TGCCGTTCGT CGAGCGGCGC CAGCGCCTGG AGGCCTTCAT CGCCCAAATT
CCGACTGGAG GGGCCGCCAG CCCGCGCATC GACCTGTCGC CGATCCAGCC GTTCGCGACC
TGGGAGGCGC TGGCGGCCTT GCGCGCCGAG CCGCCGGCCG GTGATCCCAC GATCGCCGAA
GGTCTGATGC TCAAGCGCTG GGACAGCGTC TACGAACCGG GCCGGCCCAA GGGGCCATGG
TTCAAGTGGA AGCGCGATCC ACGCCTGATC GACGCCGTGC TGATGTACGC TCAGCGCGGC
CACGGCAAGC GATCGAGCTT CTACTCCGAC TACACCTTCG GGGTCTGGCG CGAGGACGAG
ACCGGGACAC GCCACCTGAC CCCGGTCGGC AAGGCCTATT TCGGCTTCAC CGACGAGGAG
CTGAAGCAGA TCGACAAATT CGTCCGCGAC CACACCGTCG AACGGTTTGG GCCGGTGCGC
TCCGTGCGGG CCGACTGGGA TTTCGGCCTG GTGTTCGAGG TCGCCTTCGA GGGGCTGCAG
CGCTCGACCC GCCACAAGTC CGGCGTGGCC ATGCGCTTTC CGCGCATCAA CCGCATCCGC
TGGGACAAGC CGTCGCGCGA GGCGGACGAG CTGAACACGC TGGAGCGGAT GCTGGATTGA
|
|---|
| Protein sequence | MRAFAHLLDR LSLTASRNAK LTLIKDFLRE TPDPERGWVL AALTGALSFS AAKPAFIRKA
VEARMDAQLF AWSYDYVGDL AETVALVWPA KPGANREPDL SEVVEALRTA SRTEVQRLIE
GWLDALDADG RWALLKLMTG GLRVGVSARL AKQACADFGG VEIGAVEEVW HAMTPPYGDL
FAWLEGRSEQ PSPDAPGRFR PVMLAQAIDE VVDFAKLDPA DYAAEWKWDG IRVQAVSERG
ERRLYTRTGD DISATFPDVL EALTFEGALD GELLVMRDGR VASFGDLQQR LNRKTVDAKQ
LANFPIGIRA YDLLLDGEAD LRGLPFVERR QRLEAFIAQI PTGGAASPRI DLSPIQPFAT
WEALAALRAE PPAGDPTIAE GLMLKRWDSV YEPGRPKGPW FKWKRDPRLI DAVLMYAQRG
HGKRSSFYSD YTFGVWREDE TGTRHLTPVG KAYFGFTDEE LKQIDKFVRD HTVERFGPVR
SVRADWDFGL VFEVAFEGLQ RSTRHKSGVA MRFPRINRIR WDKPSREADE LNTLERMLD
|
|---|
| |