Gene Caul_4887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4887 
Symbol 
ID5902349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5282660 
End bp5284195 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content70% 
IMG OID641565407 
Productsignal recognition particle protein 
Protein accessionYP_001686505 
Protein GI167648842 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACG GCCTTTCAGA GCGACTTTCA GGCGTCTTCG ACCGCCTCGG CGGTCGCGGC 
GTGCTGTCCG AGAAGGACAT CGACGAAGCG CTGCGCGAAG TCCGCGTCGC CCTGCTGGAA
GCCGACGTCG CCCTGCCGGT GGTCAAGGAC TTCATCAGCA AGGCCAAGGA AGCCGCTTCG
GGCGAAGCCG TCATCCGCTC GGTCAAGCCG GCCGACCAGG TGGTCAAGAT CGTCTATGAC
GGCCTGGTCG ACATGCTGGG CGGCGAGGTC CCCACCGGCC TGAACCTGGC CCTGAACCCG
CCGTCGGTGA TCCTGATGGC CGGCCTGCAG GGCTCGGGCA AGACCACCAC CACCGGCAAG
CTGGCCCTGC GGCTGAACAA GGTCGAGCGC AAGAAGGTGC TGGTCGCCTC GCTCGACACC
CGCCGCCCGG CCGCCATGGA ACAGTTGGCC ATGCTGGCCA AGCAGGTCGA GGTCGAGTGC
CTGCCGATCG TTCCCGGCCA GAGCGCCGCC GACATCGCCC GCCGCGCCCT GACCGCCGCC
AAGCTGGGCG GCTACGACGT CCTGATCCTC GACACCGCCG GCCGCACCAC CCTGGACGAG
GCGATGATGA GCGAGGCGGC GGAAATCGCC CGCATCGCCC AACCGTCCGA GACCTTGCTG
GTCGCCGACA GCCTGACCGG CCAGGACGCG GTCCGGACCG CGAAAGCCTT CCACGAACGC
CTGCCGCTGA CCGGCCTGAT CCTGACCCGC GCCGATGGCG ACGGTCGCGG CGGGGCGGCG
CTGTCGATGC GCCATGTCAC CGGCCTGCCG ATCAAGTTCC TGGGCGCCGG CGAGAAGATC
GACGCGCTCG ACGTGTTCGA CGCCCGTCGC GTGGCCGGTC GGATCCTGGG ACAGGGCGAC
GTGGTCGCCC TGGTCGAGCG GGCCGCGCAA GACCTCGACG TGGCCGAAGC CGAGCGCATG
GCCAAGAAGC TGGCCAAGGG CCAGTTCGAC CTCAACGACC TGGCCGCCCA GCTGAACCAG
ATGCAGAAGA TGGGCGGCAT GCAGGGCATC ATGGGCCTGC TGCCGGGCGT CCAGAAGGTC
AAGAAGCAGA TCGCCGAGAG CGGCGTCGAC GACAGCGTCT TCCGCCGCCA GCAGGCGATC
ATCGGCTCGA TGACCAAGCT GGAGCGCAAG AAGCCCGACG TCCTGGCCGC CTCGCGCAAG
CGCCGCATCG CGGCCGGCGC CGGGGTCGAC GTGGCCGAGG TCAACCGCCT GCTCAAGCAG
CATCGCCAGA TGGCCGACAT GTTCAAGGCC ATGAGCAAGG ACGGCGGCAA GGGCATGGCC
CGCATGGCCG GCATGCTCGG CGGCGGCGAC ATGTCTCGGC TCAAGGCCAT GGGCGGCGGC
AAGGTGGCCG CGCCCGATCA GACTTCCGCG GGGGGCCTTG GCGGCCTTCC GGGGCTCCCC
GGTCTTCCGG GATCCGGGGG CGGCGGCGAC GCCAAGCCCA ACCTCCTGTC CGGACTGGGC
GGCCTGCCCC CCGGCTTCAA CCCGTTCAAG AAATAG
 
Protein sequence
MFDGLSERLS GVFDRLGGRG VLSEKDIDEA LREVRVALLE ADVALPVVKD FISKAKEAAS 
GEAVIRSVKP ADQVVKIVYD GLVDMLGGEV PTGLNLALNP PSVILMAGLQ GSGKTTTTGK
LALRLNKVER KKVLVASLDT RRPAAMEQLA MLAKQVEVEC LPIVPGQSAA DIARRALTAA
KLGGYDVLIL DTAGRTTLDE AMMSEAAEIA RIAQPSETLL VADSLTGQDA VRTAKAFHER
LPLTGLILTR ADGDGRGGAA LSMRHVTGLP IKFLGAGEKI DALDVFDARR VAGRILGQGD
VVALVERAAQ DLDVAEAERM AKKLAKGQFD LNDLAAQLNQ MQKMGGMQGI MGLLPGVQKV
KKQIAESGVD DSVFRRQQAI IGSMTKLERK KPDVLAASRK RRIAAGAGVD VAEVNRLLKQ
HRQMADMFKA MSKDGGKGMA RMAGMLGGGD MSRLKAMGGG KVAAPDQTSA GGLGGLPGLP
GLPGSGGGGD AKPNLLSGLG GLPPGFNPFK K