Gene Caul_4879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4879 
Symbol 
ID5902341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5274122 
End bp5275711 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content68% 
IMG OID641565399 
Productalkyl hydroperoxide reductase, F subunit 
Protein accessionYP_001686497 
Protein GI167648834 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR03140] alkyl hydroperoxide reductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACG ATGGTCTGAA GACCCAGCTG AAAGCCTATC TGCAGAACCT GCGTCAGCCG 
ATCGAACTGG TCGCCTCGCT GGGCGAGGGC GCGGGATCCA AGGACATGCT GGCGCTGCTC
GAGGACGTGG CGGCGACCTC CGACAAGGTC GGCCTGAGCC TGGCCGGCGA CGACGCCCGC
AAGCCGTCCT TCGCCATCAC CCGCGCCAGC GGCGACGCCA AGGTCCGCTT CGCCGGCCTG
CCCCTGGGCC ACGAGTTCAC CTCGCTGGTG CTGGCCCTGC TGCACGTCGG CGGCCACCCG
CCCAAGTTCG ACGCCGAGGT CCTCGACCAG GTCCGCGCCC TGGAGGGCGA GTTCCGCTTC
GAGACCTATT TCTCGCAGAC CTGCCAGAAC TGCCCGGACG TGGTCCAGGC GCTCAACACC
ATGGCGGCCC TGAACCCCAA CATCAGCCAC GTCGCCATCG ACGGCGCGCT GTTCCAGCAA
GAGGTCGAAG ACCGCCAGAT CATGGCCGTG CCGACCATCC TGCTGAACGG CCAGCCGTTC
GGCCAGGGCC GGATGAGCCT GGAGCAGATC CTGGCCAAGC TCGACACCGG CGCGACGGCC
CGCGAGGCCG AGAAGATCAA GGCCAAGGAC GCCTATGACG TTCTTGTTGT CGGTGGCGGC
CCCGCGGGCG CCGCGGCGGC GATCTACGCC GCCCGCAAGG GCATCCGCAC CGGCGTCGCC
GCCGAACGCT TCGGCGGCCA GGTGCTGGAC ACCATGGCCA TCGAGAACTT CATCTCGGTC
TCCCACACCG AAGGCCCCAA GCTGGCGACG GCGCTGGAGC AGCACGTCAA GGACTACGAC
GTCGACATCA TGAACCTGCA GAAGGCCGTC GGCCTGGTTC CGGCCAAGAT CCCGGGCGGA
CTGATCGAGG TCAAGCTGGA GAACGGCGCC AGCTTGACGT CGCGGACCGT GGTCCTGGCC
ACCGGCGCCC GCTGGCGGCA CATCAACGTC CCCGGCGAGG ACGAGTACCG CAACAAGGGC
GTGGCCTATT GCCCGCACTG TGACGGTCCG CTGTTCAAGG GCAAGCGCGT GGCGGTGATC
GGCGGCGGCA ATAGCGGCGT CGAGGCGGCC ATCGACCTGG CCGGCATCGT CGCCCACGTG
ACCCTGATCG AGTTCGATGG CGAGTTGCGC GCCGACGCCG TGCTGCAGCG CAAGCTGGCC
AGCCTGCCCA ACGTGCGGAT CGTCACCTCG GCCCTGACCA CCGAGATCCA CGGCGACGGG
ACCCGCGTCA ACGGCCTGAC CTACAAGGAC CGCAACCAGG ACTCCCTGCA CCGCGTGGAC
CTGGAAGGCG TGTTCGTGCA GATCGGCCTG GTCCCCAACA CCGAGTGGCT CAAGGACACC
GGGGTGGCCC TGACCAATCG CGGCGAGATC GAGGTCGACT ATCGCGGCGC GACTTCGCTG
CCGGGCGTGT TCGCGGCCGG CGACGCGACC ACCACGCCCT ACAAGCAGAT CGTCATCGCC
ATGGGCGAAG GCGCGAAGGC GGCCCTGTCG TCCTTCGACT TCCTGATCCG CCAGGAGCCG
ATGGTCCCGG CCGAGCAGGT CGCGGCCTGA
 
Protein sequence
MLDDGLKTQL KAYLQNLRQP IELVASLGEG AGSKDMLALL EDVAATSDKV GLSLAGDDAR 
KPSFAITRAS GDAKVRFAGL PLGHEFTSLV LALLHVGGHP PKFDAEVLDQ VRALEGEFRF
ETYFSQTCQN CPDVVQALNT MAALNPNISH VAIDGALFQQ EVEDRQIMAV PTILLNGQPF
GQGRMSLEQI LAKLDTGATA REAEKIKAKD AYDVLVVGGG PAGAAAAIYA ARKGIRTGVA
AERFGGQVLD TMAIENFISV SHTEGPKLAT ALEQHVKDYD VDIMNLQKAV GLVPAKIPGG
LIEVKLENGA SLTSRTVVLA TGARWRHINV PGEDEYRNKG VAYCPHCDGP LFKGKRVAVI
GGGNSGVEAA IDLAGIVAHV TLIEFDGELR ADAVLQRKLA SLPNVRIVTS ALTTEIHGDG
TRVNGLTYKD RNQDSLHRVD LEGVFVQIGL VPNTEWLKDT GVALTNRGEI EVDYRGATSL
PGVFAAGDAT TTPYKQIVIA MGEGAKAALS SFDFLIRQEP MVPAEQVAA