| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4838 |
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| Symbol | sdhA |
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| ID | 5902300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 5236105 |
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| End bp | 5237892 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641565358 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001686456 |
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| Protein GI | 167648793 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCT ACAAGTTCAT CGACCACAAG TTCGACGTCG TCGTCGTCGG CGCCGGCGGT
TCGGGGCTCC GCGCCGCGCT GGGCTGCGCC CAGGCCGGGC TGAAGACCGC CTGCGTGACC
AAGGTGTTCC CGACGCGCAG CCACACGGTC GCCGCCCAGG GTGGGATCTC GGCCTCGCTG
GGCAACATGG GCCAGGACGA CTGGCGCTGG CACATGTTCG ACACCGTCAA GGGCTCGGAC
TGGCTGGGCG ACCAGGACGC CATCGAATAT CTGACCCGCA ACGCGCCGGC CGCGGTCTAT
GAGCTGGAGC ACTGGGGCGT GCCGTTCTCG CGCACCGTGG ACGGCAAGAT CTATCAGCGC
GCCTTCGGGG GCATGACCAA GAACTTCGGC GAAGGCCCGA TCCAGCGCAC CTGCGCGGCG
GCCGACCGCA CCGGTCACGC CATGCTGCAC ACGATGTACG GCCAGTCCCT GGCCCACGAC
ACCGAGTTCT TCATCGAGTA TTTCGCCCTC GACCTGATCA TGGAAGACGG CGTCTGCCGG
GGCCTCACCG CCTGGAAGCT GGACGACGGC ACCCTGCACC GGTTCCAGGC TCAGATGGTC
ATCCTGGCCA CCGGCGGTTA CGGCCGCGCC TACTTCTCGG CCACCTCGGC CCACACCTGC
ACGGGCGACG GCAACGCCAT GGCCCTGCGC GCCGGCCTGC CGCTGCAGGA CATGGAATTC
GTGCAGTTCC ACCCCACCGG CATCTACGGC GCCGGCTGCC TGATCACCGA AGGCGCCCGC
GGCGAAGGCG GCTACCTGAC CAATTCGGAA GGCGAGCGCT TCATGGAGCG CTATGCGCCG
TCCGTGAAGG ACCTGGCCCC GCGCGACATG GTCAGCCGGG CCATGACCAT CGAGATTCGC
GAAGGGCGCG GCGTGGGCCC CAACAAGGAC CACATCTTCC TGCACCTGGA CCATCTGGAC
CCGAAGATCC TGCACGAGCG CCTGCCCGGC ATCTCCGAGA CCGCCAAGGT CTTCGCCGGC
GTTGACGTGA CCAAGGCGCC GATCCCGGTG CTGCCGACCG TCCACTACAA CATGGGCGGC
ATCCCGACGA ACTATCACGG CGAGGTCGTC ACCAAGTCGG GCGACAATCC CGACCAGGTG
ATCCCCGGCC TGATGGCCGT GGGCGAGGCG GCCTGCGTCT CGGTGCACGG CGCCAACCGC
CTGGGCTCCA ACAGCCTGAT CGACCTGGTG GTGTTCGGTC GCGCCGCGGC CCTGCGCTGC
GCCGAGATTC TCAAGCCCCT GGCCACCCAG CCGGAGCTGA AGGACAGCAT GACCGACGGC
CACCTGGCGC GCTTCGACCG CTACCGCAAC GCCAATGGCC ATCAGCCGAC CGCCGCCCTG
CGCCTCGAAA TGCAGAAGGC CATGCAGGAA GACGCCGCGG TGTTCCGCAC GGGCGAAACC
CTGGTCGGCG GCGCCCAGCG CCTGGCCGTG GTCTGGGAAA AGGCCAAGGA CATCAAGGTC
AACGACCGCG GGATGGTGTG GAACACCGAC CTGATGGAGA CCCTGGAGTT CGACAACCTG
ATCGGCCAGG CCGTCGTGAC CGTGGCCGGG GCGGTCAACC GCACCGAAAG CCGCGGCGCC
CACGCCCGCG AGGACTTCTC CACGCGGGAC GACGCCAACT GGATGAAGCA CACCCTGGCC
TGGCTCGACC CGTCGACCGG CCAGGTGAAG ATCGATTTCC GGCCGGTGCA CAACTACACC
ATGTCCAAGG ACATCGACTA CATCCCGCCC AAGCAGCGCG TGTACTGA
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| Protein sequence | MSAYKFIDHK FDVVVVGAGG SGLRAALGCA QAGLKTACVT KVFPTRSHTV AAQGGISASL
GNMGQDDWRW HMFDTVKGSD WLGDQDAIEY LTRNAPAAVY ELEHWGVPFS RTVDGKIYQR
AFGGMTKNFG EGPIQRTCAA ADRTGHAMLH TMYGQSLAHD TEFFIEYFAL DLIMEDGVCR
GLTAWKLDDG TLHRFQAQMV ILATGGYGRA YFSATSAHTC TGDGNAMALR AGLPLQDMEF
VQFHPTGIYG AGCLITEGAR GEGGYLTNSE GERFMERYAP SVKDLAPRDM VSRAMTIEIR
EGRGVGPNKD HIFLHLDHLD PKILHERLPG ISETAKVFAG VDVTKAPIPV LPTVHYNMGG
IPTNYHGEVV TKSGDNPDQV IPGLMAVGEA ACVSVHGANR LGSNSLIDLV VFGRAAALRC
AEILKPLATQ PELKDSMTDG HLARFDRYRN ANGHQPTAAL RLEMQKAMQE DAAVFRTGET
LVGGAQRLAV VWEKAKDIKV NDRGMVWNTD LMETLEFDNL IGQAVVTVAG AVNRTESRGA
HAREDFSTRD DANWMKHTLA WLDPSTGQVK IDFRPVHNYT MSKDIDYIPP KQRVY
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