Gene Caul_4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4823 
Symbol 
ID5902285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5220322 
End bp5221662 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content72% 
IMG OID641565343 
ProductTolC family type I secretion outer membrane protein 
Protein accessionYP_001686441 
Protein GI167648778 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAGT TCCAGGCCAA GCCCGCGCCC TCCATCGCGC GGTTCGTCCC CACGCTCGCC 
CTGGCTCTGC TGCTCGGCGG ATCGGCGTTG CCGGCGACCG CCCAGACGCT CGGCGAGGCG
GCGAAACTGG CTCTGGAAAC CAATCCCTCG GTCCGGGCGC AGCGCGAGCA ACTGGGCATT
TCCCGCGAAG GCTACATCCA GGCGCGCTCC GCCCTGTTTC CGACCGTCAA CGCCCAGGCC
TCGATCGACA CCGACCGGCC CAAGCCCGCG TCGTTCGGCT ATCCCGTCAA TCACAGCGAG
GTCGGCGTGG GCCTGACCCA GCCATTGTAC GCGGGCGGCC GGACGGTCGC CGGCATGCGG
GCCGCCAAGG CCACGGTGGA GGCGTCGCGC GAACAGGTGC GAGACAGCGA GCAGGGCCTG
CTGCAGGACG TCATTTCCGC CTACACCCAG GTCATGCTGT CCGAACGGTC CGTCGTGATC
TACGGCGAGA ACGTCGACGC CCTGCGGCGA TATCTGGAGC GGGTGTCCGC GCAACGGGCC
GCCGGCGACA TCACCCAGAC CGACGTGGCC CAGGCCCAGA CCCAGTTGGC CGCCGCCGAG
GGCACGCTGG CCCAGGTCCG GGCCAACCTG GAGGCCAACC GCGCCGCCTA CCAGGCGATC
ATCGGCGAAC CGGCCGGAAC CCTGGCGGCC CCGCCCCCGC TCGACGGCCT GTTGCCCCCC
AGCCTCGACG CCGCCGCGGC CGCGGCCGAC AGCGGCAATC CCCGGGTTCG TCAGGCCCTG
CAGGCCGAAC TGGCCGCCCG AGCCCAGGTC AGCCAGGCGC GCGGCGCGCG GCTGCCGACC
GTCAACCTGA CCGCCAGCCA CGCGGCCACC GACACCGCCG CCTTCGACAA GGGTCCGCAA
TTCCTCGGCT CCGACCGCGC CACCAATGCG GCGATCACCG CGACCGTGCC GCTGTTCGCC
GGCGGCTACA TCAGCTCGCG CATTCGGCAA GCTGAGCGCA ATGACGCGAT CGCCGCCGAC
GATGTCGAGA ACGCGCGCCG CGAGGCCCGT CGCCAGGTGC TGGCGGCCTG GGGCCAGATG
GACTCCGCTC GGGTCCGACT GCGCCAGGGC GAGGCCCAGA TCGTCGCCGC CCAACTGGCG
GTTCGTGGGA TGAACGAGGA ATACGGCGCC GGCACGCGAG CGACCTACGA GGTGCTGAAC
GCCGAGCAGG AGCTTCGCAA CGCCGAGATC TCGCTCGAAA CCGCTCGGCG CGACGCCTAT
CTCGCCAACG CCGGTCTCCT GGCCGCCTCC GGTCGCCTCA GCCCCGACGT GTTGAGCGGG
GCCGTGGTCG CACAGAAATA A
 
Protein sequence
MNQFQAKPAP SIARFVPTLA LALLLGGSAL PATAQTLGEA AKLALETNPS VRAQREQLGI 
SREGYIQARS ALFPTVNAQA SIDTDRPKPA SFGYPVNHSE VGVGLTQPLY AGGRTVAGMR
AAKATVEASR EQVRDSEQGL LQDVISAYTQ VMLSERSVVI YGENVDALRR YLERVSAQRA
AGDITQTDVA QAQTQLAAAE GTLAQVRANL EANRAAYQAI IGEPAGTLAA PPPLDGLLPP
SLDAAAAAAD SGNPRVRQAL QAELAARAQV SQARGARLPT VNLTASHAAT DTAAFDKGPQ
FLGSDRATNA AITATVPLFA GGYISSRIRQ AERNDAIAAD DVENARREAR RQVLAAWGQM
DSARVRLRQG EAQIVAAQLA VRGMNEEYGA GTRATYEVLN AEQELRNAEI SLETARRDAY
LANAGLLAAS GRLSPDVLSG AVVAQK