Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4823 |
Symbol | |
ID | 5902285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 5220322 |
End bp | 5221662 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641565343 |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_001686441 |
Protein GI | 167648778 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCAGT TCCAGGCCAA GCCCGCGCCC TCCATCGCGC GGTTCGTCCC CACGCTCGCC CTGGCTCTGC TGCTCGGCGG ATCGGCGTTG CCGGCGACCG CCCAGACGCT CGGCGAGGCG GCGAAACTGG CTCTGGAAAC CAATCCCTCG GTCCGGGCGC AGCGCGAGCA ACTGGGCATT TCCCGCGAAG GCTACATCCA GGCGCGCTCC GCCCTGTTTC CGACCGTCAA CGCCCAGGCC TCGATCGACA CCGACCGGCC CAAGCCCGCG TCGTTCGGCT ATCCCGTCAA TCACAGCGAG GTCGGCGTGG GCCTGACCCA GCCATTGTAC GCGGGCGGCC GGACGGTCGC CGGCATGCGG GCCGCCAAGG CCACGGTGGA GGCGTCGCGC GAACAGGTGC GAGACAGCGA GCAGGGCCTG CTGCAGGACG TCATTTCCGC CTACACCCAG GTCATGCTGT CCGAACGGTC CGTCGTGATC TACGGCGAGA ACGTCGACGC CCTGCGGCGA TATCTGGAGC GGGTGTCCGC GCAACGGGCC GCCGGCGACA TCACCCAGAC CGACGTGGCC CAGGCCCAGA CCCAGTTGGC CGCCGCCGAG GGCACGCTGG CCCAGGTCCG GGCCAACCTG GAGGCCAACC GCGCCGCCTA CCAGGCGATC ATCGGCGAAC CGGCCGGAAC CCTGGCGGCC CCGCCCCCGC TCGACGGCCT GTTGCCCCCC AGCCTCGACG CCGCCGCGGC CGCGGCCGAC AGCGGCAATC CCCGGGTTCG TCAGGCCCTG CAGGCCGAAC TGGCCGCCCG AGCCCAGGTC AGCCAGGCGC GCGGCGCGCG GCTGCCGACC GTCAACCTGA CCGCCAGCCA CGCGGCCACC GACACCGCCG CCTTCGACAA GGGTCCGCAA TTCCTCGGCT CCGACCGCGC CACCAATGCG GCGATCACCG CGACCGTGCC GCTGTTCGCC GGCGGCTACA TCAGCTCGCG CATTCGGCAA GCTGAGCGCA ATGACGCGAT CGCCGCCGAC GATGTCGAGA ACGCGCGCCG CGAGGCCCGT CGCCAGGTGC TGGCGGCCTG GGGCCAGATG GACTCCGCTC GGGTCCGACT GCGCCAGGGC GAGGCCCAGA TCGTCGCCGC CCAACTGGCG GTTCGTGGGA TGAACGAGGA ATACGGCGCC GGCACGCGAG CGACCTACGA GGTGCTGAAC GCCGAGCAGG AGCTTCGCAA CGCCGAGATC TCGCTCGAAA CCGCTCGGCG CGACGCCTAT CTCGCCAACG CCGGTCTCCT GGCCGCCTCC GGTCGCCTCA GCCCCGACGT GTTGAGCGGG GCCGTGGTCG CACAGAAATA A
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Protein sequence | MNQFQAKPAP SIARFVPTLA LALLLGGSAL PATAQTLGEA AKLALETNPS VRAQREQLGI SREGYIQARS ALFPTVNAQA SIDTDRPKPA SFGYPVNHSE VGVGLTQPLY AGGRTVAGMR AAKATVEASR EQVRDSEQGL LQDVISAYTQ VMLSERSVVI YGENVDALRR YLERVSAQRA AGDITQTDVA QAQTQLAAAE GTLAQVRANL EANRAAYQAI IGEPAGTLAA PPPLDGLLPP SLDAAAAAAD SGNPRVRQAL QAELAARAQV SQARGARLPT VNLTASHAAT DTAAFDKGPQ FLGSDRATNA AITATVPLFA GGYISSRIRQ AERNDAIAAD DVENARREAR RQVLAAWGQM DSARVRLRQG EAQIVAAQLA VRGMNEEYGA GTRATYEVLN AEQELRNAEI SLETARRDAY LANAGLLAAS GRLSPDVLSG AVVAQK
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