Gene Caul_4801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4801 
Symbol 
ID5902263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5191709 
End bp5193031 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID641565321 
ProductO-antigen polymerase 
Protein accessionYP_001686419 
Protein GI167648756 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.141517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTT CGGCCAATTC GCGTGAAGAC CGGCGGGCCG CTTCGGCCGG CATCCCCGAC 
GACGACGGAT CGCGGGTGGA TTGGTGGCTG CTGTTTCTGC TGCAATGCAT CACCATCCCC
CAGACCTTCT ACACGCCCGG CCTGATCGCC AGTACGGCGG TGTCCCTGAT CATGGTGGCT
CGTCGTCCAG CGCAGTCCTT GAGCGCGATC GGCCGCTACT GGCCCACCTA TGCCCTGGTC
CTGCTGGCCT TGGCCTCGGT GTTCTGGTCC GAACAGCCCG ACAAGACCTT GCGCACCGGC
ATATCCGCGC TGTTGTTCGC GTTCAGCGCG ATCGTGTTCG CGACAAGGGT CGGAATTACC
CGCGCGGTCA GCGCCCTGTT TCTCGCCAGC TTCGTGATGG CGATCATTCA GTTGGCCGTC
CACCGCACCG GCAACGCCGT CGAGGGCCTG GTCCCCATCG GCCTGATGGG CGCCAAGAAC
GGCTTCTCGT TCTTCGGCCA GCAGTTGCTG CTGCTGTGCC TGGCGATGGC GCTGGACGGC
AATCAGCCAA AGCCCTTGCG GCTGCTGAGC CTGCCAGCGA CGCTGATCGC TCTCTATATA
CTGGCCGCCA CCCATTCTGC CGGCGGCATG GTCTCGGCGG CCATCGGTTC GGCGATCTTG
ATCGCCATGG TGGTGATCGG CAAGGCGCCG CCCCGGATGC GCGCGCTGTG CCTGGTCGCC
TTGGTCGTTG TCTGCGCCCC GCTGGCGGCG TCCCATCAGG AAGTGGAAAC TGCCGCCAGC
GACTTCAGCC AGGACGTGCT GAAGAAGGAC ACCACCCTGA CCGGCCGCGC CTATCTATGG
TATCGCGCCC AGCCGATCAT CGGCCAGAAG CCCGTGCTAG GCCATGGCTT CCAGGCCTTC
TGGACCCAAG GCAACGAGGA CGCCGAAGGG CTGTGGAACT GGGCCAAGAA CAAGTCCCGG
GCCGGGTTCA ACTTCCACAA CACCTATATC GAGATGCAGG TCGATCTCGG CATGGTCGGC
CTGATCGGCC TGATCGGCAT GCTGGCGATC ACCGTCCTGC TGTCCGCCGC GGCCTGGCTG
ACCGCGCCGA ACGTCAGCCT GGCCTGGATG TTCGCTGCGA TGGTCGCCCT GCTTTCACGA
ACGCCGACAG AGAGCATGAT CAGCAGCATC CTGCCGCAGA TCGCCACCTG GCTGGTCTAT
GCCTGGGTGG GACTGAAGCA TCACAGCCCG GCTCCGCTCG CGACCGAGCG GACCGCGACC
CGGGAACGGC GACAACATCA ACGAGGGGCC ACGCGTGGCC CTGTCCCCGG ACGGACCAGG
TAG
 
Protein sequence
MRLSANSRED RRAASAGIPD DDGSRVDWWL LFLLQCITIP QTFYTPGLIA STAVSLIMVA 
RRPAQSLSAI GRYWPTYALV LLALASVFWS EQPDKTLRTG ISALLFAFSA IVFATRVGIT
RAVSALFLAS FVMAIIQLAV HRTGNAVEGL VPIGLMGAKN GFSFFGQQLL LLCLAMALDG
NQPKPLRLLS LPATLIALYI LAATHSAGGM VSAAIGSAIL IAMVVIGKAP PRMRALCLVA
LVVVCAPLAA SHQEVETAAS DFSQDVLKKD TTLTGRAYLW YRAQPIIGQK PVLGHGFQAF
WTQGNEDAEG LWNWAKNKSR AGFNFHNTYI EMQVDLGMVG LIGLIGMLAI TVLLSAAAWL
TAPNVSLAWM FAAMVALLSR TPTESMISSI LPQIATWLVY AWVGLKHHSP APLATERTAT
RERRQHQRGA TRGPVPGRTR