Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4792 |
Symbol | |
ID | 5902254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 5180557 |
End bp | 5182383 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641565312 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001686410 |
Protein GI | 167648747 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC AGCTTTTGAA CATGAACGCG GACTCGGTTA TACTGGCCAC GAGCATGGCG AGCCGAACCG TCTGGTATGG GTCGGGTAAC CGCGAAATCA TCACCGGCGG CGATCAGAGC GATGGATTAC GCGGCAATGG CGGCGGCGAC ACCCTGGTCG GCGGCAAGGG CGACGACACC TATTACGCCC ACCCGGACGA CATTGTCGTC GAGAAGGCTA ACGGCGGCGT CGACACGATC TCGTCCCTCG ACAATTTCAC CCTGCCCGAC CACGTCGAAA ACCTGACGAT CACCGGGTTG AACAAGACCG GGGTCGGCAA CAGCCTGTCC AATATTCTGT CCGGCGGGAA CGGAACCCAG ACCCTGAACG GCAAGGGCGG TCTGGACGTG CTGATCGGCG GCGCCGACGC CGACATCTTC GTGATGGAAA GGGGCAATTC GCGCGACGTC ATCAACGACT TCGCGGTCGG GATCGATCAT GCCCGGTTGT CGGGCTTCAC GTTCACCAGC TTCGACCAGG TCCGCGCCAA GATGAAGCAG GCCGGTTCGG ACGTCGTGCT GGACCTCGGC GGCGGCGACC AGTTGACATT CCGCGAGCAC AAGATCGCCG ACTTCTCGGC CGCCGACTTC CAGCTGGGCC TGGACAAGAG CGGCATGAAG CTGACCTTCA GCGATGAGTT CAACGGGTTG AGCCTGTGGA ACGGCAAGAC CGGCACCTGG CGGACCGAAT TCGGCTATGG CGGAGAGGGC AGCCTGGCCA GCCGCGACGG TATCCGCGCG ATCTACGTGG ACGCCCAATT CAAGGGCACC GGCAAGAAGG CGCTCGGCGT CGATCCGTTC GATATCGACA ACGGCGTGCT CAGCATCACC GCCGCGCCAG CCACCGCCGC CGTCAAGGCG CAGATCTGGA ACCACACCTA TACTTCAGGC GTCCTGACGA CGAAGTTCTC GTTCGCCCAA GAGTACGGCT ACTTCGAGAT CAAGGCCAAG CTACCGGCGG GCCAGGGCTT CTTTCCGGCC TTCTGGCTGT TGCCGACCGA CGGCTCCTGG CCGCCGGAAA TCGACATCTT CGAGAGCCTC GGCAAGGATC CCGACACCAT CTACACCACC AGTCACAGCA ACAGCAGCGG CAAGATGGTC AGCGACGCGT CGTCGGTCCG GATCGAGGGC GCGGCCACGT CGTTCCACAC CTATGGCCTG GATTGGAGCG AAGACTATCT CGTCTGGTAC GTCGATGGCG TCGAGGTGGA GCGTCAGCAG ACGCCGGACG ACATGCACAA GCCGATGTAC ATGCTGATCA ACCTGGCGGT CGGCGGCGGC TGGGCCGGCG AGCCGACGGC GGCCACTGGC TCCGGCCAGT TGGAAATCGA CTATGTCCGC ACCTACGCGC ACGATGCATC CCCGCCACCA CCACCACCAC CGCCTCCTCC TCCTCCTCCT CCTCCTCCTC CTCCTCCTCC TCCTCCTCCT CCGCCTCCTC CTCCGCCGCC GCCGGTCGAA ACCTCGCCGA AGATCGTTCT GGCGGGCACC ACGGCCAATG ACAGCTTCAT TTTGAAGGCG GCGATGTTCG ACACCGACGC GACAGGGGTG CAGGCGAGCA TCAAGTCATT CGGCGGGGCC AGCGGGTGGT CGTCGAACAA CAACGACTTC GTCAGCCTGA CCGGCTGGTC GAAGGGCTCC AGCTTCACCT GGGACCACGA CGACGCCAAC GACGCCCATG TCGGTTTCTA TCGGATCCAC GACGCGTCTC TGAACAAGGA CGTCATGATC CAGATCACCA CCGTCACCGG CCAACATGTC AGCGCGGGGG ACTTCAACTT CTACTGA
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Protein sequence | MAKQLLNMNA DSVILATSMA SRTVWYGSGN REIITGGDQS DGLRGNGGGD TLVGGKGDDT YYAHPDDIVV EKANGGVDTI SSLDNFTLPD HVENLTITGL NKTGVGNSLS NILSGGNGTQ TLNGKGGLDV LIGGADADIF VMERGNSRDV INDFAVGIDH ARLSGFTFTS FDQVRAKMKQ AGSDVVLDLG GGDQLTFREH KIADFSAADF QLGLDKSGMK LTFSDEFNGL SLWNGKTGTW RTEFGYGGEG SLASRDGIRA IYVDAQFKGT GKKALGVDPF DIDNGVLSIT AAPATAAVKA QIWNHTYTSG VLTTKFSFAQ EYGYFEIKAK LPAGQGFFPA FWLLPTDGSW PPEIDIFESL GKDPDTIYTT SHSNSSGKMV SDASSVRIEG AATSFHTYGL DWSEDYLVWY VDGVEVERQQ TPDDMHKPMY MLINLAVGGG WAGEPTAATG SGQLEIDYVR TYAHDASPPP PPPPPPPPPP PPPPPPPPPP PPPPPPPPVE TSPKIVLAGT TANDSFILKA AMFDTDATGV QASIKSFGGA SGWSSNNNDF VSLTGWSKGS SFTWDHDDAN DAHVGFYRIH DASLNKDVMI QITTVTGQHV SAGDFNFY
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