| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4787 |
|---|
| Symbol | |
|---|
| ID | 5902249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 5169212 |
|---|
| End bp | 5174059 |
|---|
| Gene Length | 4848 bp |
|---|
| Protein Length | 1615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641565307 |
|---|
| Product | NAD-glutamate dehydrogenase |
|---|
| Protein accession | YP_001686405 |
|---|
| Protein GI | 167648742 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGTG CAAAACTTGA CCCCAAGGCG GTCGCAGCTC AATCGGCGGG CCTGATTTCG
GCTTTCAAAG CCGCGCTCGG GGTGGAGACC TTGACCGCGC CGCAAGCCGC CTTCGCCGCC
CAGGTCCAGG AGGATTGGTC GGCCGAGGAA CTCCCGGGGA TCGAGCCCGC CGACCTGGCT
CAAAGCTGGA TCGATTTCTG GCGTTTCGGT GAAGCCGCGT CGGATCCGCT CTCCATCCGC
GTCCGCCCCG CGCGTCGCCC CGACGGCGCC GACCTGAAGA GCGACCTGCT GGAGATCGTC
CAGCCCGACC GTCCGTTCCT GGTCGACAGC ATCATGGGCG CCATCGCCGA TCTGGGCTTC
TCGGTGCGCG CCATGTTCCA CCCGGTGGTC GATACCCCGG CCGGCCGTCG CTCGATGATC
CAGGTCTATC TGGCCCCCGT GGGCGAGGAC CGCGAGGCCG CCCTGGTCGC GGCCGTCCGC
GACGCCTTGG CCGACGTCGA GGTGGCGGTC GATGATTTCG AGGCCATGAA GGCCCTGATC
CATCGCACGA TCGATGAGCT TCGCGCGTCG AAGGCCCCCA TTCCCGAGGC CGAACGCGCC
GAGGGCCTGG CCTTCCTCGA CTGGCTGGAA GGCGACCGCT TCGTGTTCCT CGGCGCCCGG
ATCTACGAGT ATCCGCGCAC TCCCGACGGC GGCTACGCGG CCGAGGAGCC GCTATACCAG
CCCGAGGGCA GCCTGGGCGT TCTGCGCGAC CAGACCCTGA CGGTGCTGCG CAGGGGCAGC
GAGCCGGCGA TCCTGTCGCC CCAGGTCCGC GACCACCTGC TGCTGGGCGC GCCGCTGGTG
GTGGCCAAGT CGAACCTGCG GTCCAAGGTC CATCGCCGCG GCTACATGGA CTATGTCGGG
GTGCGCCGGT ACGGCGCCGA CGGCAGGCCG TCCGGCGAGG TCCGTTTCGT GGGCCTGTTC
ACCGCCGAGG CCTACGAGAC CCCGGCCCAC GAGATGCCGG TGATCCGCCG CAAGGTCGAG
CATGTGCTCA AGGAAGCTGG CAAGGATCCC GAGGGTCATA GCGGCAAGCG GCTGCGCAAC
ATCCTCGAGA CCTGGCCGCG CGATGAGCTG TTCCAGATCT CGGAAGACGA GTTGATGGCG
ATGGCCATGG GGGTGCTGCA CCTCTACGAC CGGCCTCGCG TGCGGCTGTT CGCCCGCAAG
GACCCGTTCG ACCGTTTCGT CTCGGTGCTG ATGTTCGTGC CGCGCGAGCG CTACGACTCC
GGTGTCCGTG AGCGGGCTGG CAAGATCCTG GCCGACGCCT ATCTGGGCCG GGTCAGCGCC
TATTATCCAA GCTTCTCCGA CGCGCCCCTC GCCCGGGTTC ACTATGTGCT GGGCGTGACG
CCGGGCAAGC ACGGCGACCC GGACATGTCC GTGCTGGAGG CGGCCGTCGC CGAGACGGCC
CGCACCTGGG AGGACCGTTT CGAGGCCGCC GTGCGCGACG GCGGCGCGCC GGGCCGGGTC
GTCGAGACCC TGGCCCGCTA CCAAACCGCC TTTCCGCCTG GCTATCGTGA CCAGTACGAC
GCGGCGGAAG CCCTGGCCGA CATCGCGGCG ATGGACGACC TGGGCGTCGA TGAGGCCGTG
CGCGTCCGGG CCTTCCGCCG CCCTGACGAC GACAAGCTGA CCTTCCGCTT CAAGCTGTAT
CGCCCCGGCG CGGCCGCCCC GTTGGCCGAC GTGCTGCCGA TCCTCGAACA CATGGGCCTC
AAGGCGCTGA TCGAGGACGG CTTCAAGCTG ACCCCGGCCG CCAATGTCAG TGAGGGAAGC
CACGGCAAGG TCTGGGTGCA CGAGTTCATG CTGCGCGACG AGCGCGGCGA GCACCTGTCG
TTCGACGACG TCAAGGCCGC CTTCGAGGCC GCCTTCGTCG CCATCTGGAC CGGCCGCGCC
GAGAGCGACG GCTTCAATCG CCTGGTGCTG GAACTGGGCG TCGGCTGGCG CGAGGCCGCC
CTGGTCCGCG CCCTGGCCCG CTACCGCCAG CAGACCGGTC TCGACCCCAG CCAGGGCGTG
CAGGAACAGG CCTTGTCGGA CAATCCCGGC GTCACCCGGC TGATCCTCGA CCTGTTCCGT
ATCAAGTTCG ATCCGGCCGT GCGCGCCGAT CTCGCCGCCC GCGAGCAGCA GGCCAAGGCG
GTCGAGGCCA ATATCGTCGA GGCCCTGCAG GCGGTGGAAA GCCTTGACGC CGACCGTGTG
CTGCGCCGCA TCGCCGCCCT GGTCGGGGCG ATCCAGCGGA CCAACTTCTT CCAGACCGGT
TCCGACGGCG AGCCCAAGCC CTATATCAGC TACAAGATCG CGTCGCGCGA ACTGGAAGAC
CTTCCGGCCC CAAAGCCCTA TCGCGAGATC TACGTCTCGG CCCCGCACGT CGAGGGCGTG
CATCTGCGCT TCGGCCCGGT CGCCCGGGGC GGCCTTCGGT GGTCCGACCG CCGGGACGAC
TTCCGCACCG AGGTGCTGGG CCTGGTGAAG GCCCAGCAGG TCAAGAACGC AGTGATCGTG
CCGGTGGGCT CCAAGGGCGG CTTCTTCCCG AAGAATCTGC CGCGCGGCGG GACGCCCGAC
GCCATCCGGA CCGAGGCGAT CCGCGCCTAC AAGACCTTCC TGTCGGGCCT GCTCGACATC
ACCGACAACA TCGACGCCGA CAACCGCGTC GTGCCGCCCT CGGGGGTGAT CGTCCATGAC
GGCGAGGACC CCTATCTGGT CGTCGCGGCC GACAAGGGCA CGGCCACCTT CTCCGACATC
GCCAACGGCG TGGCCGAGGA CTACGGCTTC TGGCTGGGCG ACGCCTTCGC GTCCGGCGGC
TCGGTCGGCT ACGACCACAA GGTGATGGGC ATCACCGCCC GGGGCGCTTG GGAAGCGGTC
AAGCGCCACT TCCGCGAGCT GGGCAAGGAC ATCCAGACCC AGCCCTTCAC CGTGGTCGGC
GTCGGCGACA TGAGCGGCGA CGTGTTCGGC AACGGCATGC TGCTGTCCAG GCAGACCAGG
CTGCTGGCCG CCTTCGATCA CCGCCATATC TTCCTGGATC CCGATCCGGA TCCCGCGACC
TCGTGGGCCG AACGCGACCG AATGTTCAAG CTGCCGCGCT CGTCCTGGGA TGACTACGAC
AAGAGCCTGA TCTCCAAGGG CGGCGGGGTG TTCGCCCGCT CGCTGAAGAC CATCACCCTG
ACGCCCGAGA TCCAGGCGCT GTTCGAGATC AAGTCTGCCA CCGTGACGCC GGCCGAACTG
CTCTCCGCGA TCCTGAAGTC GAAGGCCGAG CTGCTCTATC TGGGCGGCAT CGGGACCTAC
GTGAAGGCCA AGGGCGAAAG CCAGGCCGAG GCTGGCGACA AGGCCAACGA CGCCATCCGC
GTCAACGGCG CCGACCTGCG GGTCAAGGTG GTGGGCGAAG GGGCGAACCT GGGCTTCACG
CAAGCAGGGC GCATCGAGTT CGCGCAAGCG GGGGGCCGCA TCAACACCGA CGCCATCGAC
AACTCGGCCG GGGTCGACAG CTCCGACCAC GAGGTCAACA TCAAGATCCT GACCGGGATC
CTGGAGCGCG GCGGCAAGCT GACCCGCGAC AGCCGCAACC AGTTGCTGCC GACCATGACC
GACGACGTCG CCGGCCACGT GCTGGCCGAC AACTACGACC AGACCCTGGC CCTGTCGCTG
ATGGAGAGCG ACGCGGTGTC GGAGGTCGAG TCCCACGCCC AGTTCATGGC CGAGCTGGAG
GCCAAGGGCC GGCTGGACCG CAAGGTCGAG GGCCTGCCGG AAGCCATCGT GCTGTCGGAG
CGGGCCAAGG CCGGCAGGGG CCTGACCCGC CCCGAACTGG CCGTGCTGCT GGCCTATGGC
AAGATCGACC TGTTCGACGA CATCGTCGCC TCTCAGGCGC CGGACGATCC GTGGTTCCAG
GCGACGCTGG CGGGCTACTT CCCGCCGGCG CTCGGCCGAT ATGCCGACGA GATGCAGCGC
CACCGGCTGA AGCGCGAGAT CATCGCCACG GTGCTCGACA ACCAGATGAT CAACATGTGC
GGTCCAACCT TCCCGCAACG CCTGAAGGCG GCGGCTGGCT GCGACACCAC GGCCCTGGTG
GTGGCCTTCG CCGCCGCGCG CCAGATCCTC GGGATCGACG CCCTGTGGGA CCAGGTCTCG
GCCCTGGACG GCAAGGCTTC AGCCTCTGGC CAGTTGGCGC TGTACAAGGC CCTGGCCTAC
GCCGTGCGCA GCCTGACCTT CTGGCTGGCC CGGCGGGCGT TCCGCGACAA GCTCACGGTC
AGCAGCCTGG TCGAGGCCTA TGGCCCGTCG GTCAAGACGC TGGACGCCCT GACGCCCGCC
ATCCTGTCGC CGTTCGAACA GAAGGCCGTG GCCAAGCGGG CCAAGGCCTA TATCGCCGAC
GGCGCGCCCG AGGCCCTGGC CCAAGGCGTG GCGGCGTTGC AGCCCCTGAC CACGGCGGCC
GACCTGGTGG ACCTGGGCAA CGCATCCAGC TGGTCGGTCG CGAACGTCGC CCGGCTCTAT
CACCAGGTCG GCGCGGCCTT CGGGTTTGAC CGTCTGCGCG GCGCGGCCGG CTCGTTCATC
GGCGGCGACC CCTTCGAGCG GCTGGCGGTG CGCCGCTTGA TCGAGGACAT GCTCGGCGAG
CAGACCGCCA TCACCCAGAC GGTGCTGAAG TTCGCGGCCA ACGCCCAGGC GGGCGAGGAC
GAGGTCTCGG CCAAGGCGGC GGTCAGTTCC TGGGCCGCCC TGCGCGCCGA CGGCGTCCGC
GCCGCCAAGC GCACGGTCGA GGACATCGAA CAGGCCGGCG GCGGCTGGAC CTTCGCCAAG
CTGACCATCG CCAACGCCGC GTTGCGAGGT TTGGCGAGCG CGAACTAG
|
|---|
| Protein sequence | MVGAKLDPKA VAAQSAGLIS AFKAALGVET LTAPQAAFAA QVQEDWSAEE LPGIEPADLA
QSWIDFWRFG EAASDPLSIR VRPARRPDGA DLKSDLLEIV QPDRPFLVDS IMGAIADLGF
SVRAMFHPVV DTPAGRRSMI QVYLAPVGED REAALVAAVR DALADVEVAV DDFEAMKALI
HRTIDELRAS KAPIPEAERA EGLAFLDWLE GDRFVFLGAR IYEYPRTPDG GYAAEEPLYQ
PEGSLGVLRD QTLTVLRRGS EPAILSPQVR DHLLLGAPLV VAKSNLRSKV HRRGYMDYVG
VRRYGADGRP SGEVRFVGLF TAEAYETPAH EMPVIRRKVE HVLKEAGKDP EGHSGKRLRN
ILETWPRDEL FQISEDELMA MAMGVLHLYD RPRVRLFARK DPFDRFVSVL MFVPRERYDS
GVRERAGKIL ADAYLGRVSA YYPSFSDAPL ARVHYVLGVT PGKHGDPDMS VLEAAVAETA
RTWEDRFEAA VRDGGAPGRV VETLARYQTA FPPGYRDQYD AAEALADIAA MDDLGVDEAV
RVRAFRRPDD DKLTFRFKLY RPGAAAPLAD VLPILEHMGL KALIEDGFKL TPAANVSEGS
HGKVWVHEFM LRDERGEHLS FDDVKAAFEA AFVAIWTGRA ESDGFNRLVL ELGVGWREAA
LVRALARYRQ QTGLDPSQGV QEQALSDNPG VTRLILDLFR IKFDPAVRAD LAAREQQAKA
VEANIVEALQ AVESLDADRV LRRIAALVGA IQRTNFFQTG SDGEPKPYIS YKIASRELED
LPAPKPYREI YVSAPHVEGV HLRFGPVARG GLRWSDRRDD FRTEVLGLVK AQQVKNAVIV
PVGSKGGFFP KNLPRGGTPD AIRTEAIRAY KTFLSGLLDI TDNIDADNRV VPPSGVIVHD
GEDPYLVVAA DKGTATFSDI ANGVAEDYGF WLGDAFASGG SVGYDHKVMG ITARGAWEAV
KRHFRELGKD IQTQPFTVVG VGDMSGDVFG NGMLLSRQTR LLAAFDHRHI FLDPDPDPAT
SWAERDRMFK LPRSSWDDYD KSLISKGGGV FARSLKTITL TPEIQALFEI KSATVTPAEL
LSAILKSKAE LLYLGGIGTY VKAKGESQAE AGDKANDAIR VNGADLRVKV VGEGANLGFT
QAGRIEFAQA GGRINTDAID NSAGVDSSDH EVNIKILTGI LERGGKLTRD SRNQLLPTMT
DDVAGHVLAD NYDQTLALSL MESDAVSEVE SHAQFMAELE AKGRLDRKVE GLPEAIVLSE
RAKAGRGLTR PELAVLLAYG KIDLFDDIVA SQAPDDPWFQ ATLAGYFPPA LGRYADEMQR
HRLKREIIAT VLDNQMINMC GPTFPQRLKA AAGCDTTALV VAFAAARQIL GIDALWDQVS
ALDGKASASG QLALYKALAY AVRSLTFWLA RRAFRDKLTV SSLVEAYGPS VKTLDALTPA
ILSPFEQKAV AKRAKAYIAD GAPEALAQGV AALQPLTTAA DLVDLGNASS WSVANVARLY
HQVGAAFGFD RLRGAAGSFI GGDPFERLAV RRLIEDMLGE QTAITQTVLK FAANAQAGED
EVSAKAAVSS WAALRADGVR AAKRTVEDIE QAGGGWTFAK LTIANAALRG LASAN
|
|---|
| |