Gene Caul_4774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4774 
Symbol 
ID5902236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5157512 
End bp5158201 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID641565294 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001686392 
Protein GI167648729 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.715033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.564771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG ATCCGCGCCT GATCCTGCCG CTCGACCTGT CCAGCGTGTC CGAGGCCCGA 
GCGATGGTCG AGACGCTGGG CGACGCGGTG TCATTCTACA AGATCGGCCT GGAACTGCTG
GCCACCGACG GCATGGCCCT GGCCCGCCAG CTCAAGGGCG AGGGCAAACA GATCTTCCTG
GACTGGAAGC TGCACGACAT CGGCGCGACC GTGGAGCGCT CGGCCCGGGT GCTGGCCGGG
GCCGGCTGCG ACCTGCTGAC CGTCCACGCC GAGCCGCAGG TGATGGCCGC CGCCGTCAAG
GCCAAGGGCG GCTCAGACCT GAAGATCCTG GCCGTCACCG TGCTGACCAG CCTGACCGAC
GCCGACCTGA TCGAACTTGG CTATGCCTTT TCCGCCCGCG ACCTGGTGGC CCGGCGCATC
CGCCAAGCGA TTGAAGCCGG CGTCGATGGC GTCGTCTCCT CGCCGCAGGA GGCCGCCCTG
GCCCGCGAGA TCGCCGGCCC CGACTTCCTG GTTGTGACGC CCGGCGTACG CCCCTTCTGG
TCGGCCAAGA ACGACCAGGC CCGCGCCGCC ACGCCCGCCG ACGCCCTGAA GGCCGGCGCC
AGCCACCTGG TCTGCGGCCG CCCGATCACC GCCGCCAACG ACCCGCGCGA AGCGGCGCTG
AAGGTGGTGG GGGAGATGGC GGGGCTTTAA
 
Protein sequence
MSADPRLILP LDLSSVSEAR AMVETLGDAV SFYKIGLELL ATDGMALARQ LKGEGKQIFL 
DWKLHDIGAT VERSARVLAG AGCDLLTVHA EPQVMAAAVK AKGGSDLKIL AVTVLTSLTD
ADLIELGYAF SARDLVARRI RQAIEAGVDG VVSSPQEAAL AREIAGPDFL VVTPGVRPFW
SAKNDQARAA TPADALKAGA SHLVCGRPIT AANDPREAAL KVVGEMAGL