| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4740 |
|---|
| Symbol | |
|---|
| ID | 5902202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 5126073 |
|---|
| End bp | 5127605 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641565259 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_001686358 |
|---|
| Protein GI | 167648695 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.408023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00635659 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC GCGCCGCCGA GATTTCGGCC ATCCTCAAGT CGCAGATCGC CAATTTCGGC
GAAGAAGCCG CCGTCTCGGA CGTCGGTCAG GTGCTGTCCG TCGGTGACGG CATCGCTCGC
ATCTATGGCT TGGACAACGT CCAGGCCGGC GAAATGGTCG AATTCCCGAA GGCCGGCGTG
AAGGGCATGG CCCTGAACCT CGAGCGCGAC AATGTCGGCG CCGTGATCTT CGGCCAGGAC
CAGGCCATCA AGGAAGGCGA CGAAGTCCGT CGTCTCGGCG AGATCGTCGA CGTTCCGGTC
GGCCGCGGCC TGCTGGGCCG CGTCGTCAAC CCGCTGGGCG AGCCGATCGA CGGCAAGGGC
CCGATCGTCT CGACCGAGCG TCGCCGCGTC GACGTCAAGG CGCCCGGCAT CATCCCGCGC
AAGTCGGTGC ACGAGCCCGT GCAGACCGGC CTGAAGTCGA TCGACACCCT GATCCCCGTC
GGCCGCGGCC AGCGCGAGCT GATCATCGGT GACCGTCAGA CCGGCAAGAC CGCCGTCGCC
ATCGACACCA TCCTGAACCA GAAGGCCGCC AACGCCGGCA CGGACGAGAG CGCCAAGCTC
TATTGCGTCT ATGTCGCCAT CGGCCAGAAG CGTTCGACCG TCGCCCAGAT CGTCAAGACG
CTCGAAGAGC ACGGCGCTCT GGAATACACG ATCGTCGTCG TGGCCTCGGC TTCCGAGCCG
GCCCCGCTGC AATACCTGGC CCCGTTCTCG GGCTGCGCCA TGGGCGAGTG GTTCCGCGAC
AACGGTCTGC ACGGCCTGAT CATCTATGAC GACCTTTCCA AGCAAGCTGT CGCCTACCGC
CAGATGTCGT TGCTGCTGCG CCGCCCGCCG GGCCGCGAAG CCTATCCGGG CGACGTCTTC
TACCTGCACT CCCGCCTGCT GGAACGCGCC GCCAAGCTGA ACGAAGACAA CGGTTCGGGT
TCGCTGACGG CGCTGCCGAT CATCGAAACC CAGGCCAACG ACGTTTCGGC CTACATCCCG
ACCAACGTGA TCTCGATCAC CGACGGCCAG ATCTTCCTGG AAACCGACCT GTTCTATCAG
GGCATTCGTC CCGCCGTGAA CGTCGGCATC TCGGTGTCGC GCGTCGGCTC GTCGGCCCAG
ATCAAGGCCA TGAAGCAAGT CGCCGGCGCG ATTAAGGGCG AGTTGGCCCA GTATCGCGAA
ATGGCCGCCT TCGCCAAGTT CGGCTCGGAC CTGGACGCCT CGACCCAAAA GCTGCTGGCC
CGCGGCGAGC GTCTGACCGA GCTGCTCAAG CAGCCGCAAT ACGCGCCGCA GGCCGTCGAA
GAGCAGGTCT GCGTGATCTA CGCCGGTACG CGCGGCTATC TGGACAACAT CCCGACCTCG
TCGGTCCGCC GGTTCGAGAG CGAGCTGCTG GCCCGCCTGC ACAGCCAGCA CAAGGATCTG
CTGGACAACA TTCGCACCAA GAAGGCCCTC GATAAGGACC TCGAGAACAC GCTCAAGAGC
GTGCTCGACA ACTTCTCGGC GACCTTCGCC TAG
|
|---|
| Protein sequence | MDIRAAEISA ILKSQIANFG EEAAVSDVGQ VLSVGDGIAR IYGLDNVQAG EMVEFPKAGV
KGMALNLERD NVGAVIFGQD QAIKEGDEVR RLGEIVDVPV GRGLLGRVVN PLGEPIDGKG
PIVSTERRRV DVKAPGIIPR KSVHEPVQTG LKSIDTLIPV GRGQRELIIG DRQTGKTAVA
IDTILNQKAA NAGTDESAKL YCVYVAIGQK RSTVAQIVKT LEEHGALEYT IVVVASASEP
APLQYLAPFS GCAMGEWFRD NGLHGLIIYD DLSKQAVAYR QMSLLLRRPP GREAYPGDVF
YLHSRLLERA AKLNEDNGSG SLTALPIIET QANDVSAYIP TNVISITDGQ IFLETDLFYQ
GIRPAVNVGI SVSRVGSSAQ IKAMKQVAGA IKGELAQYRE MAAFAKFGSD LDASTQKLLA
RGERLTELLK QPQYAPQAVE EQVCVIYAGT RGYLDNIPTS SVRRFESELL ARLHSQHKDL
LDNIRTKKAL DKDLENTLKS VLDNFSATFA
|
|---|
| |