| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4701 |
|---|
| Symbol | |
|---|
| ID | 5902163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 5086310 |
|---|
| End bp | 5087038 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641565220 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_001686319 |
|---|
| Protein GI | 167648656 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.196334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.523895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGACA AGGTCAAGTC CACAGCCGCC GAAGCGCTGG CGGGTCTTTT ATTCGATGGC
ATGACCATCA TGGCCGGAGG CTTCGGCCTT TGCGGCATTC CCGAGAACCT GATCGCGGCG
ATCCGCGAAA CGGGCGTCAA GGACCTCACG GTGGTCTCCA ACAATTGCGG CGTCGATGGC
TTCGGCCTGG GGATCCTGCT GGAGAACCGC CAGATCAAGA AGATGGTCTC GTCCTATGTG
GGTGAGAACA AGCTCTTCGA ACAGCTTTAC CTCTCCGGCG AGCTGGAACT GGAGTTCAAT
CCGCAGGGCA CCCTGGCCGA GCGCATCCGC GCCGGCGGGG CGGGCATTCC CGCCTTCTTC
ACGCGCACCG GGGTTGGCAC CCTGGTCGCC GAGGGCAAGG AAGTGCGCGA GTTCGACGGC
GAGCAATATG TGATGGAGCG CGGCATGGTC GCCGACCTGT CGATCGTCAA GGCCTGGAAG
GCCGACGCCG AGGGCAACCT CGTCTACCGA AAGACCGCCC GCAACTTCAA TCCGATGATG
GCGACGGCTG GCAAGGCCAC CGTCGTCGAG GTCGAGGAGG TCGTGGCGAT CGGCGCGCTG
GACAAGGACA ACATTCACAC GCCTGGCATC TATGTCGACC GTATCGTCAA GGGCGCGAAG
TTCGAGAAGC GGATCGAGCG CGTGACCACC CGGCCCAGGG AAACGGCCGC CGCGGGAGTT
GAAGTTTGA
|
|---|
| Protein sequence | MVDKVKSTAA EALAGLLFDG MTIMAGGFGL CGIPENLIAA IRETGVKDLT VVSNNCGVDG
FGLGILLENR QIKKMVSSYV GENKLFEQLY LSGELELEFN PQGTLAERIR AGGAGIPAFF
TRTGVGTLVA EGKEVREFDG EQYVMERGMV ADLSIVKAWK ADAEGNLVYR KTARNFNPMM
ATAGKATVVE VEEVVAIGAL DKDNIHTPGI YVDRIVKGAK FEKRIERVTT RPRETAAAGV
EV
|
|---|
| |