Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4694 |
Symbol | |
ID | 5902156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 5076101 |
End bp | 5078158 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641565213 |
Product | TonB-dependent receptor |
Protein accession | YP_001686312 |
Protein GI | 167648649 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCGTC GCGTTCTGCT CTCCGCCGCG AGCCTGTTGG CGTTCGCCCT TGTCGCGCCC CTTGCTCAAG CCGCCGAAAC CCCAGCGCCG GCCGACGCCG CCGCGCCGGA CGGCCCCGAC GGCCCCACCG CCGTCGACAA GGTTGTGGTC ACCGCCGCCC CCTACGCCGT CTCGCTCGAC ACCGTGACCA GCAGTGTCAA CGTCGTGACG CGCGATCAGC TCGACGTCGC CGCGCCGGCC GGCATTGGCG ACATGCTCAA CGGCCTGCCG GGCTTGCGTT CGACCTTCTA CGGTCCCGGC GCCTCGCGGC CGGTGATCCG GGGCCTGTCG GGACCGCGGG TGATGGTGCT GCAGAACGGC GTCGGCCAGG TGGACGCCAG CGCCCTGTCG CCTGACCACG CCGTGGCCAG CGACCCGGGC GAGGCCTCGC GCATCGAGGT GCTGCGCGGT CCCTCGACCC TGGCCTATGG CGGCTCGGGA ATCGGCGGGG TCGTTAACAT GATCGACGAC CGGGTGCCAT CGACGCCGGC GGCAAACGGT CCCGAGGGCC GGTTGTCGGC TTCAGCCTCA TCGGTGGACA AGGGCTACGC CTATAGCGGC GCGCTGAAGG CCGGCTCCGG CCCCATTGTC TTCGCGCTCG ATTTCTCGAG CCGCCGCACC GACGATTACG ACGTGCCGGT CGCGCCGGTT TCCGACCGCC TGGCGGCCCG GGACGGCCTC ACCGTCGATC CGGACAAGAC GGTCAAGAAC ACCGATGTCG AGGTCGACGC CTACGGCGCT GGCGTCTCCT GGGTTCACGA CCGCGGCTTC GTCGGGGCGT CGGTCAAGAA AATGGACACC ACCTACGGGG TTCCCTACGA GCAGATCCTG GCGCCGATCG ACCCCAACGC CGAGGGGCCG GTCTCGATCC ACCTGCAGCA GACCCGCTAC GACGTGCGCG GTGAACAGGC GCTGGACACG CCTTGGTTCG AGAAGGTTCG CGTCTCGCTG GGCTATGCCG ACTACGAGCA CGCCGAGGTC AGTGTCGAGG ACGGCCAGGT CGGCACCCGG TTCCTGTCGC ACGGGACCGA GGGGCGGGTG GAACTGGTTC ACCGCGAGCA CGACGGCCAC CAAGGCGCCA TCGGCTTCCA GGCTCTGGAC CGCCACTTCT CGGCGATCGG CGACGAGGCC TTCGTGCCCT CGACCGACAT CAAGGAGTAC GGAATCTTCA CCCTGCAACG CCTGGACCGC GGGACCTGGG GGATCGACGC CGGCCTGCGC TTCGACACCC GATCCTTGCA GACCCCGACC GAGAAGCGCG ACTTCGACAA TGTTTCCGGT TCGATCGGCG TGTTCCTCAA GCCGAGCGAC AGCCTGTTCT ACGCCCTGAC CCTGTCGCGT AACGGTCGCG CCCCGACCGA GTTCGAACTG TTCGCCAATG GCCCTCATCC GGGCACCGGC GGCTTCGAAG TCGGTGACAA CAAGCTCGAC AACGAGACGG TCACCTCGCT GGAGGCCACG GTGCGCTGGA AGAGCGACCG CCTGCGCGCC GAGGGCCACC TGTGGGCCGC CAAGTACGGC AGCTTCATCG AGGAGGCCCC GACTGGCGCG GTCGAGGACA ACCTGCCCGT CTACCAGTAC TTCCAGACCA AGGCCGACTT CCACGGCGCC GAACTGGAGG CCAGCTACGA CGCCTGGCGC GGGGCGACCC AGTCGCTGCG CCTGGAGACC ACGTTCGATT GGGTGCATGG CGACACCGAC GCCGGCGTGC CCGCCCGCAT CCCGCCGTGG TCGCTGGGCG GTTCGGTGGT CTGGAACGTT CCGCGCGTCG AGACCACGCT GGAGGTGCGC CGCGTGGCCG GACAGGATCG TGTCGCGCAG TTCGAACTGC CCACCGACGG CTATACGGTG GTCAACCTCA AGGCCACGTT CAAACCATCC GAAACCTCGC CCCTGCGGCT GTTCATCGAC GGCCGCAACC TGACCAACGC GGAGATCCGC GAGCACGCCT CGTTCCTCAA GGACATCGCC CCGTCGCCGG GGCGTTCGGT GCGGGCGGGG GTGGCCTGGA AGTTCTGA
|
Protein sequence | MPRRVLLSAA SLLAFALVAP LAQAAETPAP ADAAAPDGPD GPTAVDKVVV TAAPYAVSLD TVTSSVNVVT RDQLDVAAPA GIGDMLNGLP GLRSTFYGPG ASRPVIRGLS GPRVMVLQNG VGQVDASALS PDHAVASDPG EASRIEVLRG PSTLAYGGSG IGGVVNMIDD RVPSTPAANG PEGRLSASAS SVDKGYAYSG ALKAGSGPIV FALDFSSRRT DDYDVPVAPV SDRLAARDGL TVDPDKTVKN TDVEVDAYGA GVSWVHDRGF VGASVKKMDT TYGVPYEQIL APIDPNAEGP VSIHLQQTRY DVRGEQALDT PWFEKVRVSL GYADYEHAEV SVEDGQVGTR FLSHGTEGRV ELVHREHDGH QGAIGFQALD RHFSAIGDEA FVPSTDIKEY GIFTLQRLDR GTWGIDAGLR FDTRSLQTPT EKRDFDNVSG SIGVFLKPSD SLFYALTLSR NGRAPTEFEL FANGPHPGTG GFEVGDNKLD NETVTSLEAT VRWKSDRLRA EGHLWAAKYG SFIEEAPTGA VEDNLPVYQY FQTKADFHGA ELEASYDAWR GATQSLRLET TFDWVHGDTD AGVPARIPPW SLGGSVVWNV PRVETTLEVR RVAGQDRVAQ FELPTDGYTV VNLKATFKPS ETSPLRLFID GRNLTNAEIR EHASFLKDIA PSPGRSVRAG VAWKF
|
| |