| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4666 |
|---|
| Symbol | |
|---|
| ID | 5902128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 5044306 |
|---|
| End bp | 5044950 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641565185 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001686284 |
|---|
| Protein GI | 167648621 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.441468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCG GCCAACCCAA GTGGCGACGA CGCAGCGAAG CCCGCCCCGG CGAGATCATC
GAGGCGGCCC TGGTGGTGTT TTCCGAGAAG GGCTTCGCGG CCGCGCGGCT GGACGACATC
GCCGCGCGGG CGGGCGTATC CAAGGGCGCG CTCTATCTCT ATTTCGAGAC CAAGCAGGAC
CTGTTCCGGG CGGTGGTGCG CGAGACGATC GCCCCGAACC TGGCCGTGGT GGCGGCCTTC
GTTGGTCAGA GCGGCCTGGC GTTCGGCGAC CTGATCCCGC TGGTTTTCGC CCGTATCGCC
GAGGTGATGA CGACGGGCCG GCTGGGCGCG GTGGCCAAGA TGGTCATCGG CGAGTCGCGC
AACTTTCCGG AGCTTGCCAA GGTCTGGCAC GAGGACGTGG TCGTCCGGAT GCTCGACGCC
GTCGGCGGGG CGGTGGCCTC GGCCCAGGCG CGCGGCGAGG TCCGGCCGGG CGATCCCCGG
CTCTATGTGT TCAGCCTGGC CGGCCCGCTG CTGCTGGGCG TGCTGTGGCG CGAAGTGTTC
ACCCCGATCG GGGCCGAGCC GGTCGACCTG AAGGCGCTGA TGACCCAGCA CGCCCAGGTC
GTGCTGAAGG GCATGCTGCT GGAGTCCGGG GAGGCGAGGG CATGA
|
|---|
| Protein sequence | MQPGQPKWRR RSEARPGEII EAALVVFSEK GFAAARLDDI AARAGVSKGA LYLYFETKQD
LFRAVVRETI APNLAVVAAF VGQSGLAFGD LIPLVFARIA EVMTTGRLGA VAKMVIGESR
NFPELAKVWH EDVVVRMLDA VGGAVASAQA RGEVRPGDPR LYVFSLAGPL LLGVLWREVF
TPIGAEPVDL KALMTQHAQV VLKGMLLESG EARA
|
|---|
| |