Gene Caul_4647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4647 
Symbol 
ID5902109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5024186 
End bp5024827 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID641565166 
ProductHAD family phosphatase 
Protein accessionYP_001686265 
Protein GI167648602 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.402019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG AGGCGGTGAT CTGGGATTTC GGCGGGGTGT TCACCACCTC GCCCTTCGAG 
GCCTTCCGGC GGTTCGAGGC CCAGCGCGGC CTGCCCCAGG ACTTCATCCG CCGCGTCAAC
GCCGCCGACC CCGACGCCAA CGCCTGGGCG CTGTTCGAGC GTTCGGAGAT CGACGCGGCG
GCCTTCGACA CGATGTTCCT GGAAGAGTCG ACGCGCCTGG GCCACGCCCT GCGCGGCGCC
GAGGTCCTGC CGCTGCTGTC GGGCGATATC CGGCCGCGCG TGGTGGCGGC GCTGAAGGCG
TGCAAGGCGC GCTTCCGGGT CGGCTGCATC ACCAACAACG TCGTCACCGG CCACGGGACG
GGAATGTCCG GCTCGGCCGA GAAGGCTCTG GCCATGGCCG AGATCTTCAA GACCTTCGAG
GTGGTGATCG AAAGCTCGGT GGCCGGGGTC CGCAAGCCTG ATCCCCGCAT CTATCTGATG
ATGTGCGAGG CGCTGGACGT CGCGCCGGGA TCTTGCGTCT ATCTCGACGA CCTGGGGATC
AACTGCAAGC CGGCGGCGGC CCTGGGCATG ACGGCGATCA AGGTCTCCAC CGAGGACCAG
GCGCTGGAGG ACCTTGCGGC GGCGACCGGT TTGGCGTTCT GA
 
Protein sequence
MAVEAVIWDF GGVFTTSPFE AFRRFEAQRG LPQDFIRRVN AADPDANAWA LFERSEIDAA 
AFDTMFLEES TRLGHALRGA EVLPLLSGDI RPRVVAALKA CKARFRVGCI TNNVVTGHGT
GMSGSAEKAL AMAEIFKTFE VVIESSVAGV RKPDPRIYLM MCEALDVAPG SCVYLDDLGI
NCKPAAALGM TAIKVSTEDQ ALEDLAAATG LAF