Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4606 |
Symbol | |
ID | 5902068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4982095 |
End bp | 4983843 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641565125 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001686224 |
Protein GI | 167648561 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.159853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATC TGAACGGTCG CGCGCGTCGG AAGAACACCT ATGACGCCAT CGTCGTGGGC AGCGGCATCA CTGGCGGCTG GGCGGCCAAG GAGCTGACCC AGAAGGGTCT CAAGACCCTG GTGTTGGAGC GCGGCCCGAT GGTCCGCCAC ATCGAGGACT ATCCCACCGC CACCGTGGCT CCCTGGGAGA CCAAGTACCC GCAAGGGCAA TTGCCGCAGG AAGAGCTGGC CGCTCACTAC CCCGTGCAGC GCCGCACCAA CTATACGATG ACGGAGTACA CCAAGCACTT CTTCGTCCGT GACGACCAGG ACCCCTATGT CGAGGAAAGC CGCTTCGACT GGATTCGCGG CTATCACGTC GGCGGACGGT CGCTGACCTG GGGTCGCCAG AGCTATCGCC ACAGCCCCAT CGACTTCGAG GCCAACGCCC GCGAGGGGAT CGGCGTCGAC TGGCCGATCC GCTACGAGGA GCTCGCGCCC TGGTACGACC ATGTCGAGCG CTTCATCGGC GTATCGGGCC AGGCCGAGGG CCTGCCCCAC CTGCCCGACG GCCACTATCA GCCGCCGATG GAGATGAACT GCGTCGAGAA GGCCTTCAAG GCCAAGTCCG AGGCGCGATT CCCCGAGCGG CGGATCACCA TGGGGCGCAC CGCCCACCTG ACCGAGCCGA CCGAGGAGCA ACTGAGTCTG GGTCGCACCA AGTGCCAGTA CCGCAACATG TGCATGCGCG GCTGCCCGTT CGGCGGCTAT TACAGCTCCA ATTCCGGCGG GTTGGTGGCC GCCGAGCGCA CCGGCAACAT GGTGATCCGG CCCGGCTCGA TCGTCACCTC GCTGATCTAT GACGAGAAGG CCGGCAAGGC GACGGGGGTT CGCATCCTGG ACGCGACGAC CCGCCAGGAA GAGGAGTTCT ACGCCGACGT CGTGTTCCTG TGCGCCTCGG CCTTCAACTC GGCCTGGATC ATGATGAACT CGACCAGTTC GCGGTTCCCC AACGGCTTTG GCAACGGCAG CGACCAGCTC GGCCGCAACG TCATGGACCA CCATCTGGGC GTGGGGGCGT CAGGCGAGGC GCCTGAATTC GCGGACATGT ACTATTCCGG CCGTCGGCCC AATGGCATCT ACGTCCCGCG CTTCCGCAAT CTGGGCGACG CCGCCACCAA GCGCAGCGAC TACCTGCGGG GCTTCGGCTA CCAGGGCGGC GCCTCTCGCC AGGGTTGGGA CCGCGATCTT GGCAAGCACG ACGGCGAAGG CGGCGGCTTC GGGGCGGCGC GCAAGGCCGC GCTCAGCCAG GCGGGACCCT GGACCATCGG CCTGGGCGGG TTCGGCGAGA TCCTGCCCTA TCAGGACAAT CGCCTCACCC TGAACCACGA GACCCGGGAC CAGTTTGGCC TGCCGACCCT GTCGATGAAC GTCACGATCC GCGAGAACGA GATCGCCATG CGCCGCGACA TGCAGACGGC GGCGGCCGAG ATGCTGGAGG CGGCGGGCTT CAAGAACGTC CAGGGCCGCG ACGGCGGCTA TTCGCCGGGG CTGGGCATCC ACGAGATGGG CACCGCCCGC ATGGGTCGCG ATCCCAAGAC CTCGGTGCTG AACGCCCACA ACCAGGTCCA TGAGTGCAGG AACGTCTATG TCACCGATGG GGCGGCGATG ACTTCGGCAT CGTGCGTGAA CCCGTCCCTT ACCTATATGG CGCTGACGGC GCGGGCGGCC GACCACGCCG TCCAGGCGCG CAAGCGGGGA GAGCTGTGA
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Protein sequence | MANLNGRARR KNTYDAIVVG SGITGGWAAK ELTQKGLKTL VLERGPMVRH IEDYPTATVA PWETKYPQGQ LPQEELAAHY PVQRRTNYTM TEYTKHFFVR DDQDPYVEES RFDWIRGYHV GGRSLTWGRQ SYRHSPIDFE ANAREGIGVD WPIRYEELAP WYDHVERFIG VSGQAEGLPH LPDGHYQPPM EMNCVEKAFK AKSEARFPER RITMGRTAHL TEPTEEQLSL GRTKCQYRNM CMRGCPFGGY YSSNSGGLVA AERTGNMVIR PGSIVTSLIY DEKAGKATGV RILDATTRQE EEFYADVVFL CASAFNSAWI MMNSTSSRFP NGFGNGSDQL GRNVMDHHLG VGASGEAPEF ADMYYSGRRP NGIYVPRFRN LGDAATKRSD YLRGFGYQGG ASRQGWDRDL GKHDGEGGGF GAARKAALSQ AGPWTIGLGG FGEILPYQDN RLTLNHETRD QFGLPTLSMN VTIRENEIAM RRDMQTAAAE MLEAAGFKNV QGRDGGYSPG LGIHEMGTAR MGRDPKTSVL NAHNQVHECR NVYVTDGAAM TSASCVNPSL TYMALTARAA DHAVQARKRG EL
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