| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4586 |
|---|
| Symbol | |
|---|
| ID | 5902048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4960553 |
|---|
| End bp | 4961362 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641565105 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001686204 |
|---|
| Protein GI | 167648541 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCGCA AGCGCGCGTT CCTCGCAACC GTTCTCGGCC CCGTTCTGCT GCTGGCCGTC
GCGGCTCATG CGGCGGACAA GCCCGCGCCG ACGGCCGCTG TCTCCGCGGC GCAGGGTCCG
CGCAAGGCCA CGCCGGCCCA GCGGGCCGAG GTCCAGCGCG CCGATCCCCT GACCCGCATG
GCCTTCTGGT CGAACGAAGC CAGCCAGGAC GGCCGCGACG TCGAGGCCGC CGTCAACCTT
TCCCAGGCCC TGCGCGCCCT GGGCCGCTAC GACGAGGCCG CCGAGGCCGC CGCCCAGATC
CTGGTCGTCC AGCCCGACAG CTACGACGCC CTGATGGAAG CGGCCCGGGC CAATGTCGCG
CGCGGCCAGG GCTTCTACGC CATCGAGCCG GGCCGCAGGG CCGCCGCCCT GCAGCCGCGC
GACTGGCGTC CCCTGTCCTT GCTGGGCGTG GCCTATGAGC AGGCCAAGCG CGACGACGAG
GCCCTGGCGG CTCACCGTCA GGCCGTGGCC CTGGCCCCGG CCGAGGCCGT CCCCCTGGCC
AACCTGGCCA TGCACCTGGC CTCGACCGGC GACCTGCCCG GCGCCGAGGC CCTGCTGCGC
AAGGCCGCCG CCCTGCCCAC CACGACGATC CAGGTCCGCC AGAACCTGGC TCTGGTGGTT
GGCCTGCAAG GCCGCCTCGA CGAGGCCGAG AAGCTGGCCC GCCAGGATCT GCCGCCGGAG
TCGGTCGATA ACAACCTCGC CTGGCTCCGC GCCGCCACCG GCCAAGCCAG CCCGACGCGG
TCGTGGAACG CGGTGAAGGC CGGGGGCTAG
|
|---|
| Protein sequence | MCRKRAFLAT VLGPVLLLAV AAHAADKPAP TAAVSAAQGP RKATPAQRAE VQRADPLTRM
AFWSNEASQD GRDVEAAVNL SQALRALGRY DEAAEAAAQI LVVQPDSYDA LMEAARANVA
RGQGFYAIEP GRRAAALQPR DWRPLSLLGV AYEQAKRDDE ALAAHRQAVA LAPAEAVPLA
NLAMHLASTG DLPGAEALLR KAAALPTTTI QVRQNLALVV GLQGRLDEAE KLARQDLPPE
SVDNNLAWLR AATGQASPTR SWNAVKAGG
|
|---|
| |