| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4560 |
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| Symbol | dapD |
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| ID | 5902021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 4938425 |
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| End bp | 4939285 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641565079 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001686178 |
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| Protein GI | 167648515 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC CGCCCCTCCC CACACTGTCT CTGGCCGATC TGCGGACCGA AGTCGAAGCC
GCCTGGGAAG CCCGCGACGG CGTGTCCACC GCCACCACCG GTCCGGTGCG CACGGCGGTC
GAGGAGACCC TGCTGCTGAT CGACGCCGGC AAGGTCCGGG TGTCGGAGAA GCTGGACGGC
GAATGGACCA CTCACCAGTG GCTCAAGAAG GCCGTGCTGC TGTCGTTCCG CCTCAACCCC
AACGCCATCA TGCGGGCCGG AACCATGGGC GGCGCGGTCG GCCCGTGGTG GGACAAGGTG
CCCAACAAGT TCGACGGCTG GGAGGCCCCG CAGTTCGAGG CCGCCGGTTT CCGCGCCGTG
CCCGGTTCGA TCGTCCGCCG CGGCGCCTAC ATCGGCAAGA ACGTCATCCT GATGCCGTCC
TTCGTGAACA TCGGCGCCTA CGTGGATGAC AGCACCATGG TCGACACCTG GGTGACGGTC
GGTTCCTGCG CCCAGATCGG CAAGCGCGTC CACCTGTCGG GCGGCGTTGG CGTCGGCGGC
GTGCTCGAGC CCCTGCAGGC CAACCCCACC GTCATCGAGG ACGACTGCTT CATCGGCGCT
CGTTCGGAAG TGGTCGAGGG CGTGGTGATC GGCGAGGGCA GCGTCCTGTC GATGGGCGTG
TTCATCTCGA TGTCGACCAA GATCGTCGAT CGCGCGACCG GAGCGGTCCA CATCGGCAAG
GTCCCGCCCT ACAGCGTCGT CGTCCCCGGC AGCCTGCCCG ACCCCAAGGG CGGCCCCAGC
CTCTCGTGCG CGGTGATCGT CAAGACGGTC GACGCCAAGA CCCGGTCGAA GACCAGCATC
AACGACCTGC TGCGGGACTG A
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| Protein sequence | MTSPPLPTLS LADLRTEVEA AWEARDGVST ATTGPVRTAV EETLLLIDAG KVRVSEKLDG
EWTTHQWLKK AVLLSFRLNP NAIMRAGTMG GAVGPWWDKV PNKFDGWEAP QFEAAGFRAV
PGSIVRRGAY IGKNVILMPS FVNIGAYVDD STMVDTWVTV GSCAQIGKRV HLSGGVGVGG
VLEPLQANPT VIEDDCFIGA RSEVVEGVVI GEGSVLSMGV FISMSTKIVD RATGAVHIGK
VPPYSVVVPG SLPDPKGGPS LSCAVIVKTV DAKTRSKTSI NDLLRD
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