Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4538 |
Symbol | |
ID | 5901999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4911083 |
End bp | 4912873 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641565057 |
Product | ABC transporter related |
Protein accession | YP_001686156 |
Protein GI | 167648493 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.232749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATC CCGCCGCGCC GCAAGCCACC AACCGCGCCC TCGCCGCGCG GGTCTGGCGC GACTACCTCA AGCCGCGCTG GAAGGGCCTG GGCGTCTCGA TCGTCAGCGC CGCGATCGTG GCCTGGCTGA GCGTGGCCCT GGCCAGGATC ATCGAGCCGG CGATCGACAA GCTGATCACC CACCCCCAGA AGGGCGCGCT GATCACCATC CCGCTGACCA TCGTGGCCCT GGCGGTCGGG CGCGGGGTGT TCCAGGTCAT CCAGGCCAAT TTCATCAACC GCATCGGCAA CGGCGTGGTC GGCGACGTGC AGGTGCAGTT GTTCGGCAAG CTGGTCCGCT CGGACCTGGC GCGCCTGCGC TCGGGCCATA CCGGCGGCTA TGTCGCCTCG GTGCTCTACG ACGCCGGCCT GATCCGCGAA GCCTCGACCA CCGGGGTGAT CAACTACACC CGCGAGACCC TGACCGTGCT GGGCGCGCTG GTGGTGATGT TCCAACTGGA CCCAGTGCTG GCCGGCGGCG TGCTGGTGAT CGCCCCGGTT GTCAGCCTGA TCATGGGGCG GTTCTCGAAG AAGAGCACCA AGGCGGCGAA GGGCGCGATG GGCGAGACCT CCAACCTGTC GACCGCGATC ATGGAGAGCC TGGACGGCAT CAAGATCGTC AAGATGGAGA ACCGCGAGGC CTATGAGGAG GCCCGCGTTT CGGCGGTGGT CGACCGCCGC CAGCGCCACC TGATCAAGGG GTCCAACGCC CGGGCCATGG CGGCGCCGGC CACCGAGACC TTCACCACCG TGATCATCGC CGCCGTCTTC GTCTATGCCG GCTGGCGGGC CCAGAGCGGC CAGATGACGG CCGGGGTGTT CTTCGCCTTC CTGACCAACC TGCTGATGGC CGCCCAGTCG CTGCGCCAGG TGGCCAACCT GCAGACGGTG TTCAGCGAGG GCCTGACGGC GGCCCGGCGG CTGTTCTCGG CGCTCGACGT CCAGGCGACC ATCGTCGACC CGCCCGGCGC GCCCGCCCTG CCGGCCGGCG ACGCGGCGAT CGCCTTCGAC CAGGTCTGCT TCGCCTATGG CGACAACGCT CCAGCCCTGA CCGATGTCTC CCTCCAGGCC AAGCGCGGCG AGACCGTCGC CCTGGTCGGC CCGTCGGGCG GGGGCAAGAG CTCGATCCTC AACCTGATCC CGCGCTTCTA CGACGTGACG TCCGGCTCGG TGACCATCGA CGGCCACGAC GTGCGCTCGG TGACCCTCAC CAGCCTGCGC GACCGCATCG CCCTGGTCAC CCAGGAGCCG TTCCTGTTCG ACGACACCAT CCGCGCCAAC ATCGCCTACG CCCGGCCCAG CGCCGCCGAG GACGAGGTCG AGGCCGCAGC CCGCCAGGCG GCGGCGCATG ACTTCATCAG CGAACTGCCC CTGGGCTACG ACACCATCGT GGGCGAGGCC GGGGCGCGAC TGTCGGGCGG CCAGCGCCAG CGCATCGCCA TCGCCCGCGC CTTCCTCAAG GACGCCCCGA TCCTGCTGCT GGACGAAGCG ACCAGCGCGC TGGACACGCA GAGCGAGGCC CAGGTCCAGG CGGCGCTGGA ACGGCTGATG GCCGGCCGCA CCACCATCGT GATCGCCCAC CGGCTGTCGA CCGTGAAGGA CGCCGACCGC ATCTACGTGA TCGACCGGGG CCGGGTGGTC GAGACCGGAA CCCACGCCTC GCTGGTGCGC CACAAGGGGC TCTATGCCCG CCTGGCCAAG GCCCAGGACC TGGACCAGTT GCCGGAGACT TCCTCGGAGA TTGGGACTTG A
|
Protein sequence | MTDPAAPQAT NRALAARVWR DYLKPRWKGL GVSIVSAAIV AWLSVALARI IEPAIDKLIT HPQKGALITI PLTIVALAVG RGVFQVIQAN FINRIGNGVV GDVQVQLFGK LVRSDLARLR SGHTGGYVAS VLYDAGLIRE ASTTGVINYT RETLTVLGAL VVMFQLDPVL AGGVLVIAPV VSLIMGRFSK KSTKAAKGAM GETSNLSTAI MESLDGIKIV KMENREAYEE ARVSAVVDRR QRHLIKGSNA RAMAAPATET FTTVIIAAVF VYAGWRAQSG QMTAGVFFAF LTNLLMAAQS LRQVANLQTV FSEGLTAARR LFSALDVQAT IVDPPGAPAL PAGDAAIAFD QVCFAYGDNA PALTDVSLQA KRGETVALVG PSGGGKSSIL NLIPRFYDVT SGSVTIDGHD VRSVTLTSLR DRIALVTQEP FLFDDTIRAN IAYARPSAAE DEVEAAARQA AAHDFISELP LGYDTIVGEA GARLSGGQRQ RIAIARAFLK DAPILLLDEA TSALDTQSEA QVQAALERLM AGRTTIVIAH RLSTVKDADR IYVIDRGRVV ETGTHASLVR HKGLYARLAK AQDLDQLPET SSEIGT
|
| |