Gene Caul_4538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4538 
Symbol 
ID5901999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4911083 
End bp4912873 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content70% 
IMG OID641565057 
ProductABC transporter related 
Protein accessionYP_001686156 
Protein GI167648493 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.232749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CCGCCGCGCC GCAAGCCACC AACCGCGCCC TCGCCGCGCG GGTCTGGCGC 
GACTACCTCA AGCCGCGCTG GAAGGGCCTG GGCGTCTCGA TCGTCAGCGC CGCGATCGTG
GCCTGGCTGA GCGTGGCCCT GGCCAGGATC ATCGAGCCGG CGATCGACAA GCTGATCACC
CACCCCCAGA AGGGCGCGCT GATCACCATC CCGCTGACCA TCGTGGCCCT GGCGGTCGGG
CGCGGGGTGT TCCAGGTCAT CCAGGCCAAT TTCATCAACC GCATCGGCAA CGGCGTGGTC
GGCGACGTGC AGGTGCAGTT GTTCGGCAAG CTGGTCCGCT CGGACCTGGC GCGCCTGCGC
TCGGGCCATA CCGGCGGCTA TGTCGCCTCG GTGCTCTACG ACGCCGGCCT GATCCGCGAA
GCCTCGACCA CCGGGGTGAT CAACTACACC CGCGAGACCC TGACCGTGCT GGGCGCGCTG
GTGGTGATGT TCCAACTGGA CCCAGTGCTG GCCGGCGGCG TGCTGGTGAT CGCCCCGGTT
GTCAGCCTGA TCATGGGGCG GTTCTCGAAG AAGAGCACCA AGGCGGCGAA GGGCGCGATG
GGCGAGACCT CCAACCTGTC GACCGCGATC ATGGAGAGCC TGGACGGCAT CAAGATCGTC
AAGATGGAGA ACCGCGAGGC CTATGAGGAG GCCCGCGTTT CGGCGGTGGT CGACCGCCGC
CAGCGCCACC TGATCAAGGG GTCCAACGCC CGGGCCATGG CGGCGCCGGC CACCGAGACC
TTCACCACCG TGATCATCGC CGCCGTCTTC GTCTATGCCG GCTGGCGGGC CCAGAGCGGC
CAGATGACGG CCGGGGTGTT CTTCGCCTTC CTGACCAACC TGCTGATGGC CGCCCAGTCG
CTGCGCCAGG TGGCCAACCT GCAGACGGTG TTCAGCGAGG GCCTGACGGC GGCCCGGCGG
CTGTTCTCGG CGCTCGACGT CCAGGCGACC ATCGTCGACC CGCCCGGCGC GCCCGCCCTG
CCGGCCGGCG ACGCGGCGAT CGCCTTCGAC CAGGTCTGCT TCGCCTATGG CGACAACGCT
CCAGCCCTGA CCGATGTCTC CCTCCAGGCC AAGCGCGGCG AGACCGTCGC CCTGGTCGGC
CCGTCGGGCG GGGGCAAGAG CTCGATCCTC AACCTGATCC CGCGCTTCTA CGACGTGACG
TCCGGCTCGG TGACCATCGA CGGCCACGAC GTGCGCTCGG TGACCCTCAC CAGCCTGCGC
GACCGCATCG CCCTGGTCAC CCAGGAGCCG TTCCTGTTCG ACGACACCAT CCGCGCCAAC
ATCGCCTACG CCCGGCCCAG CGCCGCCGAG GACGAGGTCG AGGCCGCAGC CCGCCAGGCG
GCGGCGCATG ACTTCATCAG CGAACTGCCC CTGGGCTACG ACACCATCGT GGGCGAGGCC
GGGGCGCGAC TGTCGGGCGG CCAGCGCCAG CGCATCGCCA TCGCCCGCGC CTTCCTCAAG
GACGCCCCGA TCCTGCTGCT GGACGAAGCG ACCAGCGCGC TGGACACGCA GAGCGAGGCC
CAGGTCCAGG CGGCGCTGGA ACGGCTGATG GCCGGCCGCA CCACCATCGT GATCGCCCAC
CGGCTGTCGA CCGTGAAGGA CGCCGACCGC ATCTACGTGA TCGACCGGGG CCGGGTGGTC
GAGACCGGAA CCCACGCCTC GCTGGTGCGC CACAAGGGGC TCTATGCCCG CCTGGCCAAG
GCCCAGGACC TGGACCAGTT GCCGGAGACT TCCTCGGAGA TTGGGACTTG A
 
Protein sequence
MTDPAAPQAT NRALAARVWR DYLKPRWKGL GVSIVSAAIV AWLSVALARI IEPAIDKLIT 
HPQKGALITI PLTIVALAVG RGVFQVIQAN FINRIGNGVV GDVQVQLFGK LVRSDLARLR
SGHTGGYVAS VLYDAGLIRE ASTTGVINYT RETLTVLGAL VVMFQLDPVL AGGVLVIAPV
VSLIMGRFSK KSTKAAKGAM GETSNLSTAI MESLDGIKIV KMENREAYEE ARVSAVVDRR
QRHLIKGSNA RAMAAPATET FTTVIIAAVF VYAGWRAQSG QMTAGVFFAF LTNLLMAAQS
LRQVANLQTV FSEGLTAARR LFSALDVQAT IVDPPGAPAL PAGDAAIAFD QVCFAYGDNA
PALTDVSLQA KRGETVALVG PSGGGKSSIL NLIPRFYDVT SGSVTIDGHD VRSVTLTSLR
DRIALVTQEP FLFDDTIRAN IAYARPSAAE DEVEAAARQA AAHDFISELP LGYDTIVGEA
GARLSGGQRQ RIAIARAFLK DAPILLLDEA TSALDTQSEA QVQAALERLM AGRTTIVIAH
RLSTVKDADR IYVIDRGRVV ETGTHASLVR HKGLYARLAK AQDLDQLPET SSEIGT