Gene Caul_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4516 
Symbol 
ID5901977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4889110 
End bp4889790 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID641565035 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_001686134 
Protein GI167648471 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.60729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA ACAACGAAAA TGGCGAAACG GCTCAGGCCC GCGCGCCCGG CGAAAAAAAC 
GGCGGCCAGA AGGTCGTCAT CAAGAAATAC GCCAACCGTC GCCTCTACAA CACAGCGTCT
TCCTCTTACG TCACCCTCGA GCACCTGTCG GACATGGTGA AGGAGGGGGT CGACTTCGTG
GTCTACGACG CCAAGACCAA CGACGACATC ACCCGCTCGG TGCTGACCCA GATCATCTTC
GAAGAGGAAA ATCGCGGCGG CGGCCAGAAC CTGCTGCCGA TCCAGTTCCT GCGCCAGTTG
ATCGGCTTCT ACGGCAATTC GATGCAGGCG TTCCTGCCCA GCTATCTGGA AATGTCGCTG
GAGAGCTTCA CCAAGCAGCA GGAGCGGATG CGCACCCAGT TCTCGGGCCT GACGCCCGGC
CTGGGCGGCG CGACCAAGGG CATGGTCGGG ATGGGGGTCT ACGAGGACCA GATCCGCCAG
AACATGGCGC TGTTCGACCG GGCCATGAAG ATGTTCTCGC CGTTCGCCTA CGCCCGGCCC
GAGGACGCTG CGGCCGCTCC CGCCGCGGCC GAACCGCCGG CCGCCGCCAC AGCCGCGCCC
AGCGAGGACT CCCTGGCCGA CCTCAAGCGC CAGCTGGAAG CCATGCAGCA ACAGATCGAG
AAGCTGGCGA CCAAGCCATA A
 
Protein sequence
MSENNENGET AQARAPGEKN GGQKVVIKKY ANRRLYNTAS SSYVTLEHLS DMVKEGVDFV 
VYDAKTNDDI TRSVLTQIIF EEENRGGGQN LLPIQFLRQL IGFYGNSMQA FLPSYLEMSL
ESFTKQQERM RTQFSGLTPG LGGATKGMVG MGVYEDQIRQ NMALFDRAMK MFSPFAYARP
EDAAAAPAAA EPPAAATAAP SEDSLADLKR QLEAMQQQIE KLATKP