Gene Caul_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4505 
Symbol 
ID5901966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4876618 
End bp4878285 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content65% 
IMG OID641565024 
Productcytochrome c oxidase, subunit I 
Protein accessionYP_001686123 
Protein GI167648460 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02891] cytochrome c oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.651872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACG CCGCTGACAT CGATCATCAC GACGCGTCTC ACGACGACGC CGACCACAAG 
CCGCCCTTCT TCCAGCGTTG GTTCTTCTCG ACCAACCACA AGGACATCGG CACGCTCTAC
ATCCTGTTCG CCATCATGGC GGGCCTGGTG GGCGGCGCGC TGTCGGGCCT GATCCGCTGG
GAACTGGCCG AGCCGGGCAT CCAGATCTTC GGCCCCAACT CGACCATCCA CCTGATGGGC
CTCGTCGAGC AGTCCAAGCA TGGCTACAAC GCCGTGGTCA CCGCCCACGC CCTGATCATG
ATCTTCTTCA TGGTCATGCC GGCGATGATC GGCGGGTTCG GCAACTGGTT CGTGCCGATC
ATGATCGGCG CGCCGGACAT GGCCTTCCCG CGGATGAACA ACATCTCGTT CTGGCTGCTG
GTCGCCGCCT GGGTGCTGCT GCTGACCTCG ATGTTCTCGC CCGGCGGTCC TGGCCAAGGC
TTCGGCGGCG GCTGGACGAT CTATCCGCCG CTGTCGACCA CCGGCCACAC CGGCCCGGCG
ATGGACCTGG CGATCCTGGC CCTCCACCTG GCCGGCGCCT CGTCGATCCT CGGCGCGATC
AACTTCATCA CCACGATCTT CAACATGCGC GCGCCGGGCA TGACCCTGCA CCGCATGCCG
CTGTTCGCCT GGTCGGTGCT GATCACCGCC TTCCTGCTGC TGCTGTCGCT GCCCGTGCTG
GCCGGCGCCA TCACCATGCT GCTGACCGAC CGCAACTTCG GCACCCACTT CTTCGACCCG
GCCGCCGGCG GCGACCCCGT CATGTTCCAG CACCTGTTCT GGTTCTTCGG TCACCCGGAA
GTGTACATCC TGATCCTGCC AGGCTTCGGC ATGATCAGCC ACATCGTCTC GACCTTCTCC
AAGAAGCCGA TCTTCGGCTA TCTGGCGATG GCCTACGCCA TGGTCGCCAT CGGCTTCGTC
GGCTTCATCG TGTGGGCGCA CCACATGTAC ACGGTCGGCA TGAGCATCAA CCTGCGCGCC
TATTTCGTGG CCGCCACGAT GGTCATCGCG GTGCCCACCG GCGTGAAGAT CTTCTCGTGG
ATCGCCACGA TGTGGGGCGG GTCGATCAGC TTCAAGACGC CCATGCTGTG GGCGATCGGC
TTCATCTTCC TGTTCACCGT CGGCGGCGTG ACCGGCGTGG TCCTGTCGAA CGCCGGCATC
GACTACAGCC TGCACGACAC CTACTACGTC GTCGCCCACT TCCACTACGT GCTGTCGCTG
GGCGCCGTGT TCGCCATCTT CGCCGGCTTC TTCTACTGGT TCGAGAAGAT GTGGGGCGTG
AAGTACAACG AGTTCCTGGG CTGCGTGCAG TTCTGGATCA TGTTCATCGG CGTGAACCTG
GTGTTCTTCC CGCAGCACTT CCTGGGTCTG CAGGGCATGC CGCGCCGCTA TGTCGACTAC
CCGCTGGCCT TCGCCCACTG GAACTACGTC TCGTCGGTCG GCTACGCGAT CACCGCCGTG
GGCGTGCTGG TCTTCCTGGT GATCCTGCTG GAAGCCGCCA TCCGTCGTCG CCCGGCCGAG
GCCAATCCGT GGGGCGAAGG CGCCACCACC CTGGAATGGA CCCTGTCGTC GCCGCCGCCC
TTCCACCAGT TCAGCGAGCC GCCGGTCATC AGGGCCGACA GCCACTGA
 
Protein sequence
MAHAADIDHH DASHDDADHK PPFFQRWFFS TNHKDIGTLY ILFAIMAGLV GGALSGLIRW 
ELAEPGIQIF GPNSTIHLMG LVEQSKHGYN AVVTAHALIM IFFMVMPAMI GGFGNWFVPI
MIGAPDMAFP RMNNISFWLL VAAWVLLLTS MFSPGGPGQG FGGGWTIYPP LSTTGHTGPA
MDLAILALHL AGASSILGAI NFITTIFNMR APGMTLHRMP LFAWSVLITA FLLLLSLPVL
AGAITMLLTD RNFGTHFFDP AAGGDPVMFQ HLFWFFGHPE VYILILPGFG MISHIVSTFS
KKPIFGYLAM AYAMVAIGFV GFIVWAHHMY TVGMSINLRA YFVAATMVIA VPTGVKIFSW
IATMWGGSIS FKTPMLWAIG FIFLFTVGGV TGVVLSNAGI DYSLHDTYYV VAHFHYVLSL
GAVFAIFAGF FYWFEKMWGV KYNEFLGCVQ FWIMFIGVNL VFFPQHFLGL QGMPRRYVDY
PLAFAHWNYV SSVGYAITAV GVLVFLVILL EAAIRRRPAE ANPWGEGATT LEWTLSSPPP
FHQFSEPPVI RADSH