| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4434 |
|---|
| Symbol | rplA |
|---|
| ID | 5901895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4801960 |
|---|
| End bp | 4802649 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641564952 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_001686052 |
|---|
| Protein GI | 167648389 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC AACCCAAGCG CATTCAAGCG TGGACCGGCG ATCGTGAAGC CGCCCACGCC
GTCGCCGAAG CCATCGCCCT GGTGAAGGCC AACGCCAAGG CCAAGTTCGA CGAGTCGATC
GAGATCTCGG TCAACCTCGG CGTTGATCCG CGCCACGCCG ACCAACAGGT CCGCGGCGTC
GTGAACCTGC CGTCGGGCAC CGGCCGCGAC GTCCGCGTCG CCGTCTTCGC CAAGGACGCC
AAGGCGGCCG AAGCGACCGC CGCTGGCGCT GAACACGTCG GCGCCGAAGA CCTGTACGAA
AAGATCGTCG GCGGCTTCAT GGACTTCGAT CGCGTCATCG CGACCCCGGA CATGATGGCC
CTGGTCGGTC GTCTGGGTAA GGTGCTGGGT CCGCGCGGCC TGATGCCGAA CCCGAAGGTC
GGCACCGTGA CCCCGAACGT CGGTCAAGCC GTGAAGGACG CCAAGGGCGG CGCCGTCGAG
TTCCGCGTCG AGAAGGCGGG CATCGTCCAC GCCGGCATCG GCAAGGTCTC GTTCACCGAC
GAAGCCCTGC TGATCAACGT CAAGGCGATG GTCGACGCCC TGGTCAAGGC CAAGCCGGCC
GGCGCCAAGG GCATCTATGT CAAGCGTATC GGCCTGTCCT CGACGATGGG TCCGGGCTTC
AAGATCGATA TCGCTTCGGT CAACGCCTAA
|
|---|
| Protein sequence | MAKQPKRIQA WTGDREAAHA VAEAIALVKA NAKAKFDESI EISVNLGVDP RHADQQVRGV
VNLPSGTGRD VRVAVFAKDA KAAEATAAGA EHVGAEDLYE KIVGGFMDFD RVIATPDMMA
LVGRLGKVLG PRGLMPNPKV GTVTPNVGQA VKDAKGGAVE FRVEKAGIVH AGIGKVSFTD
EALLINVKAM VDALVKAKPA GAKGIYVKRI GLSSTMGPGF KIDIASVNA
|
|---|
| |